Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0579 ATGCGAAATATCAACTCGGTGAAGGAAGAATTTCTGAAGAAATGGATATGGGGTCTGAGAAAATATAGCTCTCAGAAGAAGAACATGAGTCTGATGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTAGCTATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAGGGCCCTTATTGCCAATGCTTCAAGAGATGGCAACAACAACAAAGTCCTCGCAGAACACGTGACATCATCACCACAGAGGCCGGTAGCAGGGAAAAGCTTCACAGCAAGGATCAGAAGCTGCAGAAACATGTTGAGAAGAAACCGTGCAGTGCACAGCAGAGCAAAGGATAGGGTGGTGGCGAGTTCCGTTGCGAAGAGGCTGGTTCAGAAGAGAACGCGAAGGCTCAAGAGTCTCTTACCAGGAGGAGAATCCATGGACGGTGTGTCTTTGGTTGAAGAAACCCTAGATTATATACAATCACTGCGAGCTCAAGTTGAAGTAATGAGAAGTCTTGTCACTGCCTCAGAGATCAAGATCCTAAATCCATCGGGTGGAGAAAAACAGGCGCTCCCATATATACGTTAA 579 0.4646 MRNINSVKEEFLKKWIWGLRKYSSQKKNMSLMERKKAIKLSADLAMASTRNKTTRWSRALIANASRDGNNNKVLAEHVTSSPQRPVAGKSFTARIRSCRNMLRRNRAVHSRAKDRVVASSVAKRLVQKRTRRLKSLLPGGESMDGVSLVEETLDYIQSLRAQVEVMRSLVTASEIKILNPSGGEKQALPYIR* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0579 192 CDD bHLH_AtIBH1_like 115 170 IPR044549 GO:0006355
Gso17g0579 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 172 - -
Gso17g0579 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 172 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0579 Gso-Chr17 5380128 5381511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0579 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 42.778 1.23e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0579 - - gmx:100814789 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0579 17 5380128 5381511 Gso17g0579 17 5380128 5381511 ECH
Gso13g0647 13 20588782 20590166 Gso17g0579 17 5380128 5381511 GST