Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0535 ATGAGAGAATATTGGACCTCGTTGGCTTCAGTTTTGGGTGTGTTTGCCTTCTGCCAAACCATCCTCCAAGCAGTGTTCCCACCGGAGCTGCGCTTCGCTTCCGTGAAGCTCTTCCACCGGGTCTTCCACTGCTTCTCCACCTACTGCTACTTCGACATAACGGAGATCGACGGTGTGAACACCAACGAGCTCTACAACGCCGTCCAGCTGTACCTGAGCTCCTCCGTCTCCATCACCGGCAACCGGCTGAGCCTCACACGCGCCGTGAACTCGTCCGGGTTCACCTTCGGCCTCGCGAACAATGACAGCATCGTGGACACCTTCAACGGCGTGAACGTGCTGTGGGAGCACGTGGTGACCCAGCGGCAGGCCCAGACCTTCTCGTGGCGGCCACTCCCCGACGAGAAGCGTGGTTTCACGCTCCGCATAAAAAAAAAGGACAAGTCCTTCATACTAAACTCCTACTTGGATTACATTATGGAGAAAGCCAGCGACATTCGGAGGAAGAATCAGGATCGGCTCCTCTACACCAATTCCAGGGGTGGCTCCCTGGACTCGCGGGGCCACCCTTGGGAATCTGTGCCTTTCAAGCACCCAAGCACGTTTGACACATTGGCCATGGACCCTCACAAGAAGAAGCAGATCATGGAGGATCTTCAGGACTTCGCCAATGGGCAATCTTTTTACCATAAAACCGGTAGGGCTTGGAAGAGAGGCTACCTTCTCTATGGCCCTCCAGGTACTGGTAAATCAAGCATGATTGCCGCTATGGCCAATTTTCTCGGCTATGATATTTACGATTTGGAGTTGACTGAGGTTCATAACAACTCTGAACTCAGGAAGCTTCTCATGAAAACCAGCTCCAAATCGATTATTGTTATTGAAGACATTGACTGCTCTATCAATCTCACCAACAGAAAGAACAATAACAGCTCGAGTTCCGTTTCTGCTTCGACAGGTTACTATGATTCGGAGATACGCGGTGGCGGCGGTGGTTGTGCTGAGGAGGGTGGTAACAATATTACTCTTTCTGGGTTGTTGAATTTTACTGATGGATTGTGGTCTTGTTGTGGAAGTGAGAGGATTTTTGTGTTTACTACCAACCACATTGAGAAGCTTGACCCTGCTCTGCTGCGGAGTGGGAGAATGGATATGCATATCTTCATGAGTTACTGTTCTTTCCCCGCGCTGAAGATTCTGCTGAAGAATTACTTGGGGTGTGAAGAGTGTGAGCTTGAGGAGCCGATTTTGAAGCGGCTGGAGGAGGTTGTCGACGTGGCCCGGATGACTCCGGCGGATATAAGCGAGGTTTTGATCAAGAACAGACGCAAGAGAGAGAAGGCGGTGGAGGAGTTGTTGGAGACTTTGAAGCTGCGAGCGGAGATGAATGAAAAAAATGGAGTTCTGAGGGTGACTAATGGGGTTGAAGAGGAGGAAGAGCAAGAGAAGAGGGCTTTAGACAGTGAGAGTCCTAAGCAGGAGTCAGAGATTGAGGACAATTGCAAGGAGGAGGAGGAAGAAGAAGAGAAGATCAAGTAA 1539 0.5062 MREYWTSLASVLGVFAFCQTILQAVFPPELRFASVKLFHRVFHCFSTYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSGFTFGLANNDSIVDTFNGVNVLWEHVVTQRQAQTFSWRPLPDEKRGFTLRIKKKDKSFILNSYLDYIMEKASDIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPHKKKQIMEDLQDFANGQSFYHKTGRAWKRGYLLYGPPGTGKSSMIAAMANFLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKNNNSSSSVSASTGYYDSEIRGGGGGCAEEGGNNITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSFPALKILLKNYLGCEECELEEPILKRLEEVVDVARMTPADISEVLIKNRRKREKAVEELLETLKLRAEMNEKNGVLRVTNGVEEEEEQEKRALDSESPKQESEIEDNCKEEEEEEEKIK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0535 512 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Gso17g0535 512 PANTHER BCS1 AAA-TYPE ATPASE 2 504 - -
Gso17g0535 512 Gene3D - 192 391 IPR027417 -
Gso17g0535 512 MobiDBLite consensus disorder prediction 469 512 - -
Gso17g0535 512 MobiDBLite consensus disorder prediction 471 498 - -
Gso17g0535 512 CDD AAA 237 298 - -
Gso17g0535 512 Pfam ATPase family associated with various cellular activities (AAA) 241 312 IPR003959 GO:0005524|GO:0016887
Gso17g0535 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 454 IPR027417 -
Gso17g0535 512 PANTHER BNAC03G12930D PROTEIN 2 504 - -
Gso17g0535 512 SMART AAA_5 236 393 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0535 Gso-Chr17 4927005 4929033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0535 212 458 Calmodulin-binding Proteins AT3G56690 26.459 6.36e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0535 - - gmx:100794195 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0535 17 4927005 4929033 Gso17g0535 17 4927005 4929033 ECH
Gso13g0689 13 21072468 21074803 Gso17g0535 17 4927005 4929033 GST