Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g0525 | ATGGACTCTTCTTCTTCATCACCGCCAAACAGCACCAACAACAACTCCCTCGCTTTCTCTCTTTCCAATCACTTTCCCAACCCTTCTTCCTCTCCCCTTTCTCTCTTCCACTCCTTCACCTATCCATCTCTCTCTCTCACAGGCAGCAACACGGTGGACGCACCGCCTGAGCCCACCGCTGGAGCAGGACCGACCAACCTCTCCATATTCACCGGCGGCCCCAAGTTCGAGGACTTTCTGGGCGGTTCCGCCGCAACAGCCACCACCGTCGCGTGTGCACCGCCACAGCTTCCGCAGTTCTCCACCGACAACAACAACCACCTATACGATTCGGAGCTGAAGTCAACAATAGCCGCGTGCTTCCCTCGCGCCTTGGCCGCCGAACAAAGCACCGAACCGCAAAAACCATCCCCCAAGAAAACCGTCGACACCTTCGGGCAACGCACCTCCATCTACCGCGGCGTGACCCGACATAGATGGACTGGGAGATACGAAGCTCATCTATGGGACAATAGTTGCAGAAGGGAAGGTCAAAGCAGGAAAGGAAGGCAAGTTTACTTGGGTGGTTATGACAAGGAGGATAAGGCAGCCAGAGCTTATGATCTCGCAGCTCTCAAGTACTGGGGTCCAACTACCACCACTAACTTTCCTATTTCCAACTATGAGAAGGAACTGGAGGAGATGAAGAACATGACTAGGCAAGAGTTTGTTGCTTCTCTTCGTAGGAAGAGCAGTGGTTTCTCTAGAGGGGCCTCTATATACAGAGGAGTAACGAGACACCACCAGCATGGCCGATGGCAGGCGAGAATAGGCAGAGTTGCCGGAAACAAAGACCTCTACCTTGGCACTTTCAGCACCCAAGAAGAAGCTGCTGAGGCCTATGACATTGCTGCTATCAAATTCAGGGGATTAAATGCAGTAACAAACTTTGACATGAGTCGCTACGACGTGAAGAGCATTGCAAATAGTACTCTTCCTATTGGTGGTTTATCTGGCAAGAACAAGAACTCCACAGATTCTGCATCTGAGAGCAAAAGCCATGAGCCAAGCCAATCCGATGGAGATCCATCATCGGCTTCATCGGTGACCTTTGCATCACAGCAACAACCTTCAAGCTCCAACTTAAGCTTTGCCATACCCATTAAGCAAGACCCTTCAGATTACTGGTCCATCTTGGGGTACCATAATACTCCCCTTGACAACAGTGGCATCAGGAACACTACTAGTACTGTTACTACAACTACTTTTCCATCCTCCAACAATGGCACTGCTAGTAGTTTGACACCCTTCAACATGGAGTTCTCAAGTGCCCCCTCAAGTACCGGCAGCGATAACAATGCCGCGTTTTTCAGTGGAGGAGGCATCTTTGTTCAGCAACAAACTAGTCATGGTCATGGAAATGCAAGCAGTGGTTCCTCCTCTTCTTCTTTAAGCTGTTCAATCCCATTCGCCACGCCCATATTTTCTCTAAATAGCAATACTAGTTATGAGAGCAGTGCTGGTTATGGAAACTGGATTGGACCTACCCTGCACACATTCCAATCCCATGCAAAACCAAGTCTCTTTCAAACGCCAATATTTGGAATGGAATGA | 1593 | 0.4972 | MDSSSSSPPNSTNNNSLAFSLSNHFPNPSSSPLSLFHSFTYPSLSLTGSNTVDAPPEPTAGAGPTNLSIFTGGPKFEDFLGGSAATATTVACAPPQLPQFSTDNNNHLYDSELKSTIAACFPRALAAEQSTEPQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSTLPIGGLSGKNKNSTDSASESKSHEPSQSDGDPSSASSVTFASQQQPSSSNLSFAIPIKQDPSDYWSILGYHNTPLDNSGIRNTTSTVTTTTFPSSNNGTASSLTPFNMEFSSAPSSTGSDNNAAFFSGGGIFVQQQTSHGHGNASSGSSSSSLSCSIPFATPIFSLNSNTSYESSAGYGNWIGPTLHTFQSHAKPSLFQTPIFGME* | 531 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g0525 | 530 | MobiDBLite | consensus disorder prediction | 351 | 366 | - | - | |
Gso17g0525 | 530 | CDD | AP2 | 252 | 313 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | ProSiteProfiles | AP2/ERF domain profile. | 151 | 217 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | ProSiteProfiles | AP2/ERF domain profile. | 253 | 311 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 16 | 529 | - | - | |
Gso17g0525 | 530 | SUPERFAMILY | DNA-binding domain | 252 | 313 | IPR016177 | GO:0003677 | |
Gso17g0525 | 530 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Gso17g0525 | 530 | Pfam | AP2 domain | 151 | 209 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | Pfam | AP2 domain | 253 | 303 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | CDD | AP2 | 150 | 219 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | PRINTS | Ethylene responsive element binding protein signature | 152 | 163 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | PRINTS | Ethylene responsive element binding protein signature | 293 | 313 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | SUPERFAMILY | DNA-binding domain | 150 | 219 | IPR016177 | GO:0003677 | |
Gso17g0525 | 530 | MobiDBLite | consensus disorder prediction | 326 | 366 | - | - | |
Gso17g0525 | 530 | Gene3D | AP2/ERF domain | 253 | 313 | IPR036955 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | Gene3D | AP2/ERF domain | 151 | 219 | IPR036955 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL5 | 16 | 529 | - | - | |
Gso17g0525 | 530 | SMART | rav1_2 | 151 | 223 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g0525 | 530 | SMART | rav1_2 | 253 | 317 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g0525 | Gso-Chr17 | 4826912 | 4830717 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g0525 | 108 | 398 | AP2-EREBP Transcription Factor Family | AT5G57390 | 70.253 | 1.76e-145 | 424 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Gso17g0525 | AP2 | 2.6e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g0525 | K09285 | - | gmx:100803558 | 978.778 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso17g0525 | 17 | 4826912 | 4830717 | Gso17g0525 | 17 | 4826912 | 4830717 | ECH | |
Gso13g0696 | 13 | 21158121 | 21161950 | Gso17g0525 | 17 | 4826912 | 4830717 | GST |