Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0517 ATGGAAGGGCAAGTAGCTAAACGCAGACGTGTATACTCCGTGGAACCGAACCAAATAGTGCAATCTATATTTACTAGGAATTATTTGAATCATTTGGTTCCAGCGTTGGTGAAGATAAAGGAAAAGAGTTCTGTGGAAGAAGATAGAAGGCATTGTGATGATATTAACAATGCTGTCAAGTATGAAGTGGACATGGCAATGGTGTTGTCAGCACAAGGATTTGCATGGAGTAACGGCCTTAAAGATAAGCTTCAAAGCGATGACGTTCATGTCAATGCAGCTAAAAGCACTAGCTTTCTTGAAAATGATGAGGCTGGTGAAGGTTCATCATCAAAGAATGCTTATGACAAAAATGAAGTTGTACTCCCAATGGAATATTTCTCTTCAAACCCTAGCTCAAAGTCTAAGTGCAAGGACATGTCAGAAATGAAAAGGGATTTAGCCAGAGAAGATGATGATAAGGAGGATGAGGACATCAGCAACCAGTGGAAGAAGCTGAGAAGGTTGATACCCGGAGGAGAAGAGATGTGTGATGATGAACAAATGGTTTCAGAGCTAGAGAGTTACATAAGCTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTTCTGTGCCACACACGCGTTAGTTAA 630 0.4111 MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVKIKEKSSVEEDRRHCDDINNAVKYEVDMAMVLSAQGFAWSNGLKDKLQSDDVHVNAAKSTSFLENDEAGEGSSSKNAYDKNEVVLPMEYFSSNPSSKSKCKDMSEMKRDLAREDDDKEDEDISNQWKKLRRLIPGGEEMCDDEQMVSELESYISCLQMQVNALQFLCHTRVS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0517 209 MobiDBLite consensus disorder prediction 127 157 - -
Gso17g0517 209 MobiDBLite consensus disorder prediction 137 151 - -
Gso17g0517 209 PANTHER TRANSCRIPTION FACTOR BHLH146 2 206 - -
Gso17g0517 209 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 206 IPR044660 GO:0006355
Gso17g0517 209 CDD bHLH_AtIBH1_like 159 203 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0517 Gso-Chr17 4715179 4716683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0517 1 84 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.674 5.74e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0517 - - gmx:100813719 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0707 13 21284792 21286246 Gso17g0517 17 4715179 4716683 GST
Gso17g0517 17 4715179 4716683 Gso15g1336 15 14017735 14018855 PCT
Gso17g0517 17 4715179 4716683 Gso9g0478 9 5040154 5041452 PCT
Gso15g1336 15 14017735 14018855 Gso17g0517 17 4715179 4716683 PCT
Gso9g0478 9 5040154 5041452 Gso17g0517 17 4715179 4716683 PCT