Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0511 ATGCCAGTGACCTTGAAAGCTTGTTACACTGTGAAGCCTATAGAGACAACATGGTGCGGACGCGTATCTTTATCTGAATGGGATCAAACAGGAAAAGTAACTCACGTCCCCATAATCTACTTCTACCGTACTCCCTCGCAAGAGAGCAACAACAACAGCATTGCTTCCACCTTGAAGGACTCATTAAGCAGAGTCCTAGTGCCATTTTATCCACTAGCCGGTCGTTTACACTGGATAAACAATGGTCGTTTAGAACTTGATTGCAACGCCATGGGAGTTCAATTCATTGAAGCTGAATCCTCATCAAGTTTTGAAGATCTCGGTGATGACTTTTCACCCTCTTCAGAATACAACTACCTTGTCCCCACTGTAGACTACACTCTCCCAATTCACGGCTTGCCCTTGGTTCTGATTCAATTAACTAACTTCAAGTGTGGTGGCGTTAGTATCGGCATAACACTTTCACACGCGGTTGTGGATGGACCAAGAGCATCACACTTTATTAGTGAGTGGGCAAGGCTTGCACGCGGCGAGCCTTTGCAAACGGTGCCGTTTCATGATCGAAAAGTGCTACATGCCGGGGACCCACCTTCGGTGTCACTAGCAAGGTGTCACTCTCACACGGAGTTTGATGAGCCTCCGTTGTTGCTCGGAAAAACGGACAACACGGAGGAAAGAAAAAAGAAGACCGCAATGGTTATCCTCAAACTGAGTAAAACACAAGTTGAGACATTGAAAAAGAGAGCAAATTATGGCGGTTATGGTAATGGTAGTTATAGCCGTTACGAGGCTATAGCTGGTCACATATGGAGAAGTGCATGTAAGGCAAGAGGGCACAAAGAGGACCAACCAACAACGCTTACTGTTATCGTTGACTCGAGAAGTCGAATGGAACCTCCTTTGCCAAAAGGGTATTTTGGGAATGCAACTTTGGACACTGTTGCTACTAGCCTTGCGGGTGATTTGGTGTCAAAGCCGTTAGGGTATGCGTCAAGTAGAATAAGAGAGGCTATTGAGAGGGTTAGTGATGAGTACGTTAGGTCGGGGATTGAGTTCTTGAAAAACCAGGAGGATTTGAGAAGGTTTCATCAAGATCTTCATGCAATAGAGAGTGAGAAGAAGGAGGAGCCTTTTTATGGGAACCCTAATCTGGCTGTGGTTAGTTGGTTGACGTTGCCGATCTATGGCGTTGATTTTGGGTGGGGGAAGGAGCTTTATATGAGTCCAGCAACGCATGACTTCGATGGAGATTTTGTGCTTCTTCCTGGTCCAGATGGGGATGGATCTTTGCTGGTTTGTTTAGGTCTGCAAGTGGAGCATATGGATGCGTTTAAGAAACATTTTTACGAGGACATTGAGTCAAAATCATGA 1371 0.4559 MPVTLKACYTVKPIETTWCGRVSLSEWDQTGKVTHVPIIYFYRTPSQESNNNSIASTLKDSLSRVLVPFYPLAGRLHWINNGRLELDCNAMGVQFIEAESSSSFEDLGDDFSPSSEYNYLVPTVDYTLPIHGLPLVLIQLTNFKCGGVSIGITLSHAVVDGPRASHFISEWARLARGEPLQTVPFHDRKVLHAGDPPSVSLARCHSHTEFDEPPLLLGKTDNTEERKKKTAMVILKLSKTQVETLKKRANYGGYGNGSYSRYEAIAGHIWRSACKARGHKEDQPTTLTVIVDSRSRMEPPLPKGYFGNATLDTVATSLAGDLVSKPLGYASSRIREAIERVSDEYVRSGIEFLKNQEDLRRFHQDLHAIESEKKEEPFYGNPNLAVVSWLTLPIYGVDFGWGKELYMSPATHDFDGDFVLLPGPDGDGSLLVCLGLQVEHMDAFKKHFYEDIESKS* 457
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0511 456 Pfam Transferase family 1 450 - -
Gso17g0511 456 Gene3D - 1 211 IPR023213 -
Gso17g0511 456 Gene3D - 218 451 IPR023213 -
Gso17g0511 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 452 - -
Gso17g0511 456 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 452 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso17g0511 Gso-Chr17 4662509 4664279 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0511 1 450 Monolignol Biosynthesis Gene Families AT5G48930 39.556 8.15e-113 337
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0511 K13065 - gmx:100777532 905.59
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0511 17 4662509 4664279 Gso17g0511 17 4662509 4664279 ECH