Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0510 ATGTCATCAGTAACCTACAAAGGCTGCTACACCGTAAGGCCTATGGAACCAACAAAGTGTGAACGCGTACCTTTATCTGAATGGGATCAAATAGGCACCATAACTCACGTTCCCACAATCTACTTCTACCGTCCCACCTCACAAGACAAAGACAACGTTAACACCGTTGCTTCCACCTTGAAAGACGCATTAAGCAGAGCCCTAGTGCCGTTTTATCCACTAGCTGGTCGTTTACATTGGATAAACAAGGGTCGTTTAGAGCTTGATTGCAACGCCATGGGGGTTCATTTCATTGAAGCTGAATCCTCACTAACCCTAGAAAATCTCGGTGACTTTTCACCCTCTTCAGAATACAACAACCTTGTCCCCAACGTAGACTACACCCTCCCAATTCACGAGCTACCCGTGGTTCTCATTCAACTAACTAACTTCAAGTGTGGTGGTTTTAGCATTAGCTTAAATACTTCACATGCTGTTGCGGATGGACCAAGTGCATTGCACTTCTTGTGTGAGTGGGCAAGGCTTTCACGCGGTGAGCTTCTTCAAACGGCGCCGTTATTCGACCGGACCGTGTTTCGTGCCGGAGAGCCTCCTCTGATGCCACTAACGGAGTGTCGCGTTCACAAGGATCAGTTCATTCACCCTCCGTTGTTGCTCGGCCAAACCAACAACACAGAAGAAAGGAAGAAAAAAACCACAGTGGTTATTCTCAAAATGACCAAAACACAAGTTGAGACACTGAAAAAGACAGCGAATGAGAGTAACAGTGGTCATGCACGTGGTTACACTCGTTATGAGAGTGTGACTGGTCATGTGTGGAGAACTGCATGCAAGGCAAGAGGGCACAAAGAGGACCAACCAACCGCGCTAGGTGTTTGTGTTGACTCGAGGAGTCGCATGGAACCTCCTTTGCCAAAAGGATATTTTGGGAATGCAACTTTGGACACTGTTGCTACTAGCCTTGCTGGTGATTTGGTGTCAAAGCCATTAGGGTATGCGTGTAGTAGAATAAGAGAGGCGATTGAGAGGGTTACTGATGAGTACGTTAGGACGGGGATTGAGTTCTTGAAGAATCAAGAGGATTTGAGTAGGTTTCAAGATCTATATGCAATAGGGAGTGAGAAGGGTCCTTTCTATGGGAACCCTAATCTTGGTGTGGTTAGTTGGTTAACGTTGCCTATCTATGGCGTTGATTTTGGGTGGGGGAAGGAGGTTTATATGGGTCCGGGGACACATGACTTCGATGGAGATTCTTTGCTTCTTCCTGGTCCAGATGGGGAGGGGTCTGTGCTGCTTGCTTTGTGTCTTCAAGTGCCGCATATGGATACGTTTAAGAAGCATTTTTATCAAGACATTAATGTGTCAGAATCATGCCAAGATTGA 1383 0.4642 MSSVTYKGCYTVRPMEPTKCERVPLSEWDQIGTITHVPTIYFYRPTSQDKDNVNTVASTLKDALSRALVPFYPLAGRLHWINKGRLELDCNAMGVHFIEAESSLTLENLGDFSPSSEYNNLVPNVDYTLPIHELPVVLIQLTNFKCGGFSISLNTSHAVADGPSALHFLCEWARLSRGELLQTAPLFDRTVFRAGEPPLMPLTECRVHKDQFIHPPLLLGQTNNTEERKKKTTVVILKMTKTQVETLKKTANESNSGHARGYTRYESVTGHVWRTACKARGHKEDQPTALGVCVDSRSRMEPPLPKGYFGNATLDTVATSLAGDLVSKPLGYACSRIREAIERVTDEYVRTGIEFLKNQEDLSRFQDLYAIGSEKGPFYGNPNLGVVSWLTLPIYGVDFGWGKEVYMGPGTHDFDGDSLLLPGPDGEGSVLLALCLQVPHMDTFKKHFYQDINVSESCQD* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0510 460 Pfam Transferase family 3 450 - -
Gso17g0510 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 452 - -
Gso17g0510 460 Gene3D - 221 451 IPR023213 -
Gso17g0510 460 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 6 452 - -
Gso17g0510 460 Gene3D - 3 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0510 Gso-Chr17 4659607 4661111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0510 4 450 Monolignol Biosynthesis Gene Families AT5G48930 38.926 2.89e-113 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0510 K13065 - gmx:100777007 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0510 17 4659607 4661111 Gso17g0510 17 4659607 4661111 ECH