LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g0500	ATGAGATTGTTGGAGTTTGGGTGTGTGTTGATTGTTCTATCTGCACTTCTGGTTTCTGGGGATGCTGAGGTTTACATAGTAACTGTTGAAGGTGACCCTATCATAAGTTATACTGGAGGTATTGATGGGTTTAAAGCTACTGCTGTGGAATCTGATGAGGAGATTGATACCACAAGTGAATTGGTTACTTCTTATGCTCGCCATCTTGAGAAAAAACATGACATGCTGCTGGGGTTGCTGTTTGAGGAAGGGACATACCAGAAACTTTATAGCTATCGACATCTTATAAATGGGTTTGCTGTTCATATTTCACCAGAACAGGCAGAAACTCTAAGACATGCTCCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACAGGAGGTGGCTTTGATCGGGCTGGAGAAGACATTGTGATTGGACTTGTGGACACAGGGATCTATCCTCAGCACCCAAGTTTTGCAACTCATAATTCTGAGCCATATGGGCCAGTTCCAAAGTACAGAGGAAAATGTGAAGCTGATCCAGAAACTAAAAGAAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCTCATGCTGCAATAGCTGCTGGGTCATTTAACCCTTCAATTGACTTTGCTTCTCCTCTTGATGGAGATGGACATGGAAGTCATACAGCCTCTATTGCGGCCGGAAATAATGGAATTCCTGTGAGGATGAATGGCCATGAATTCGGGAGAGCGAGTGGGATGGCTCCTCGTGCTAGGATTGCTGTCTACAAGGCAATTTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTATATGATGGAGTTGATATACTCAACCTTTCAGTTGGACCCGACAGTCCTCCAGCAGCCACCAAAACTACATTTTTGAACCCTTTTGATGCCACACTTCTTGGAGCCGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATCATGGTCCTCTTCCTAAGACATTGGTTTCATATAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAATCATTTGATCCTTGGAAATGGAAAAACCTTAGCAGGAATTGGGTTATCACCTTCCACACATTTAAACGAAACATACACATTGGTTGCCGCAAATGATGTGTTGCTAGATTCTTCACTTATGAAGTATAGCCCCACGGATTGCCAGAGACCAGAACTTTTAAATAAGAATTTAATAAAGGGAAATATTCTTCTCTGTGGATATTCCTTCAACTTTGTTGTTGGCACTGCATCGATCAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACATTTCCCTAGGAACAAAATTTAATCCAGTTCCTGTTGGCCTTCCTGGGATTCTCATCATAGATGTCAGCAATTCAAAGGAACTGATAGATTATTATAATATCACTACACCAAGAGACTGGACTGGGCGAGTAAAGAGTTTCGAAGGTAAAGGTAAAATCGGTGATGGTTTGATGCCTATTCTGCATAAATCTGCACCACAGGTAGCATTATTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAAGCGTTTGCCATGATATCTGGAACCAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCTCATTGGAGCCCTGCAGCCATTAAATCAGCTTTGATGACTACATCAACGACTCTGGACAGAGCAGGGGATCCTCTTCTAGCCCAGCAAACTTCTGAATCAGAAGCTATGAGGCTGGTCAAAGCTACTCCTTTTGATTATGGGAGTGGTCATGTTGATCCAACTGCTGCATTGGACCCTGGGCTCATCTTTGATGCAGGGTACGAGGATTATATAGGCTTCTTGTGCACAACACCTAGCATTGATGTTCATGAGATAAGGAACTACACTCACACCCCATGTAACACCTCCATGGGCAAACCATCAAATTTAAACACCCCATCAATCACAATTTCCCATCTTGTGAGAACTCAAGTTGTCACGCGCACGGTCACAAATGTTGCCGAGGAAGAAACCTATGTGATCACAGCCAGAATGGAACCGGCTGTTGCCATTGAAGTCAACCCTCCAGCAATGACTATCAAAGCAGGCGCATCGCACCAGTTTTTGGTGTCACTTACAGTGCGCTCGGTGACAGGAAGGTATAGTTTTGGAGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGGTGAGGATTCCTGTTCTGGCCAACGGATACCGACGATAG	2454	0.4393	MRLLEFGCVLIVLSALLVSGDAEVYIVTVEGDPIISYTGGIDGFKATAVESDEEIDTTSELVTSYARHLEKKHDMLLGLLFEEGTYQKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGLVDTGIYPQHPSFATHNSEPYGPVPKYRGKCEADPETKRSYCNGKIVGAQHFAHAAIAAGSFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMNGHEFGRASGMAPRARIAVYKAIYRLFGGFVADVVAAIDQAVYDGVDILNLSVGPDSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNHGPLPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKTLAGIGLSPSTHLNETYTLVAANDVLLDSSLMKYSPTDCQRPELLNKNLIKGNILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENISLGTKFNPVPVGLPGILIIDVSNSKELIDYYNITTPRDWTGRVKSFEGKGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEAFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGDPLLAQQTSESEAMRLVKATPFDYGSGHVDPTAALDPGLIFDAGYEDYIGFLCTTPSIDVHEIRNYTHTPCNTSMGKPSNLNTPSITISHLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASHQFLVSLTVRSVTGRYSFGEVLMKGSRGHKVRIPVLANGYRR*	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso17g0500	817	ProSiteProfiles	Serine proteases, subtilase domain profile.	123	674	-	-
	Gso17g0500	817	PANTHER	CUCUMISIN-RELATED	14	816	-	-
	Gso17g0500	817	Pfam	Fibronectin type-III domain	719	811	IPR041469	-
	Gso17g0500	817	Pfam	Peptidase inhibitor I9	24	127	IPR010259	-
	Gso17g0500	817	Gene3D	Peptidase S8/S53 domain	156	687	IPR036852	GO:0004252\|GO:0006508
	Gso17g0500	817	CDD	PA_subtilisin_like	376	514	-	-
	Gso17g0500	817	ProSitePatterns	Serine proteases, subtilase family, serine active site.	597	607	IPR023828	-
	Gso17g0500	817	SUPERFAMILY	Subtilisin-like	129	678	IPR036852	GO:0004252\|GO:0006508
	Gso17g0500	817	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	18	128	IPR037045	-
	Gso17g0500	817	Pfam	Subtilase family	154	637	IPR000209	GO:0006508\|GO:0008236
	Gso17g0500	817	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	159	170	IPR023827	-
	Gso17g0500	817	Gene3D	-	691	814	-	-
	Gso17g0500	817	CDD	Peptidases_S8_3	130	633	IPR034197	-
	Gso17g0500	817	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	14	816	IPR045051	-
	Gso17g0500	817	PRINTS	Subtilisin serine protease family (S8) signature	154	173	IPR015500	-
	Gso17g0500	817	PRINTS	Subtilisin serine protease family (S8) signature	233	246	IPR015500	-
	Gso17g0500	817	PRINTS	Subtilisin serine protease family (S8) signature	596	612	IPR015500	-
	Gso17g0500	817	Gene3D	-	369	534	-	-
	Gso17g0500	817	SUPERFAMILY	Protease propeptides/inhibitors	86	126	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g0500	Gso-Chr17	4545956	4553779	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso17g0500	4	817	Subtilisin-like Serine Gene Family	AT4G30020	78.554	0.0	1336

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso17g0500	-		-	gmx:100776104	1600.88

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso13g0720	13	21480726	21487817	Gso17g0500	17	4545956	4553779	GST
	Gso17g0500	17	4545956	4553779	Gso15g1357	15	14357764	14364076	PCT
	Gso17g0500	17	4545956	4553779	Gso9g0499	9	5351549	5358234	PCT
	Gso15g1357	15	14357764	14364076	Gso17g0500	17	4545956	4553779	PCT
	Gso9g0499	9	5351549	5358234	Gso17g0500	17	4545956	4553779	PCT