Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0495 ATGTCTTCTTCGTGTCTGAGTGGAGCCGGGGGAAGAACCTATGGATTCGATTTCGAATTCGTTAAATCTCCGTCTTCATCTACTTTCACATCACACACATCTTCTTCACCTTCCTCAACGATCTCCGAATCGAGCAATTCGCCGCTGGCAATCTCAACGAAGAAGCCCAGAACGCCGCGGAAGCGACCCAACCAAACATACAACGAAGCCGCGGCGCTTCTCTCCACGGCGTACCCGAATTTGTTCTCCACGAAGAACTTGAAAACTCAGGGCAAAGGCAAAGGCAAATTCTCGAGGCCCACATCGGAGAATTTCGATTACGATTCTTCGGAGCTGTTATTGCCGTTCAGAGTCTTCGACGGAACGGCGTCGTGTTTTCTTTTGGACCAAACGGGCCCGAAGCCCATGGAGAGGCCCAAAGTGGTGAGCGTGCAGGAGAAGGATAATAATAATAAGGCGTGTGAGAGCCCCGGCGAGATAAGCTCCATCGTGAATTTCAATTCAGTTGAATTGAACGATGACGGCGAAGAGAGCCTCGACGCGGAATCGATTCTCGATGAGGAAATCGAAGAAGGGATCGATAGCATCATGGGGAGCAGTATTCAAGAGGTCTCAAACGACGCCGTTAGTAACTTGCCCTGGATTTTGCCTTTTGGCGGGAAATTGGAGTTCCCGAGACCCCGTGTTAGGGCTCTCCGCCACGTCGACGACGGTAACTGGTGGAATTTTCCTGCCGTCGATATTCTTTCAATATCGCCCAAAATTAACACCAAGCCTCCGCCGGTGGCCGCCGAGAAGAAGATGAAGAAGAAGAAGGTTGCGGCGGCGCCGTCGCCGGTCGTCCTGGAGTTGAAGAACACGGAATTGCCCAAACCGAAACAGGGTTTGATGTTGAAATTGGATTACGACGGCGTTCGGAACGCTTGGTCTGACAGCGGAACACCGTTCACCGACGATAGCCCCCTCGCCGACGTGCCGGAAAATGACGTCACTGCGCGGTTGTCGCAAATTGATTTGTTGTGGGACAATGGAGGAGTGAGAGAAGCTAGCGTGCTGCGCTACAAGGAGAAGCGGCGAACGCGCCTCTTCTCGAAAAAGATCAGGTACCAGGTCAGGAAAGTCAACGCAGATCGACGGCCCAGAATGAAGGGACGATTTGTTAGGAGGCTCAATTCTAGCTCAAATGCACACAGATGA 1197 0.5213 MSSSCLSGAGGRTYGFDFEFVKSPSSSTFTSHTSSSPSSTISESSNSPLAISTKKPRTPRKRPNQTYNEAAALLSTAYPNLFSTKNLKTQGKGKGKFSRPTSENFDYDSSELLLPFRVFDGTASCFLLDQTGPKPMERPKVVSVQEKDNNNKACESPGEISSIVNFNSVELNDDGEESLDAESILDEEIEEGIDSIMGSSIQEVSNDAVSNLPWILPFGGKLEFPRPRVRALRHVDDGNWWNFPAVDILSISPKINTKPPPVAAEKKMKKKKVAAAPSPVVLELKNTELPKPKQGLMLKLDYDGVRNAWSDSGTPFTDDSPLADVPENDVTARLSQIDLLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRLNSSSNAHR* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0495 398 MobiDBLite consensus disorder prediction 24 64 - -
Gso17g0495 398 ProSiteProfiles CCT domain profile. 347 389 IPR010402 GO:0005515
Gso17g0495 398 MobiDBLite consensus disorder prediction 24 53 - -
Gso17g0495 398 Pfam CCT motif 347 388 IPR010402 GO:0005515
Gso17g0495 398 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 393 - -
Gso17g0495 398 PANTHER OS02G0148000 PROTEIN 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0495 Gso-Chr17 4498786 4502303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0495 281 389 C2C2-CO-like Transcription Factor Family AT1G68520 42.424 1.27e-21 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso17g0495 CCT 7.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0495 - - gmx:100810303 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0495 17 4498786 4502303 Gso17g0495 17 4498786 4502303 ECH
Gso13g0726 13 21524286 21527683 Gso17g0495 17 4498786 4502303 GST
Gso17g0495 17 4498786 4502303 Gso15g1367 15 14511089 14513829 PCT
Gso17g0495 17 4498786 4502303 Gso9g0507 9 5454676 5457051 PCT
Gso15g1367 15 14511089 14513829 Gso17g0495 17 4498786 4502303 PCT
Gso9g0507 9 5454676 5457051 Gso17g0495 17 4498786 4502303 PCT