Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0461 ATGGATCCTGTTATGGTGGGCAATGGGCATGGGCATGGCAGCAAGGTTTCCACACTGGATCTGCTAAGACTTAACGGTACGAATGACATCGAGAAAGCAACTGATAATTTCCATGCTTCAAGAATACCTGGAGAGGGGGTTTTTGGCCTTGTTTACAGTGGTATCCTTGAAGATGGGATGAAAGTGGCATTCAAGGTTCTAAAAAGGGAGGACCCTCATGGTGATCATGAATTCTTAGCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATTTGGTCAAGTTAATTGGGGTTGACAGGGAAATCAGCCCCCTTGATTGGGGTGCCCGGATGAAAATAGCTCTTGGAGCAGCTCCTGGTCTTGCTTATCTGCATGAAGATTCAAGTCCTCGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGATTGGCTTGAACGGAACAACCGAACAAGTGATGAATTTGAATCCATGACAATATCTGCACTTGGTCAAAAGTCAAAACCTATTATTCAGCAAGATTTGGCAGAGTCTGGATCATATAGAAGAAACTCTTATTCAGTTCATAATCTTAACTTTGCAAAGAGGCATTCACTCCTCGGCTATGAGAGCCTTATTAGGCTTCGGAATAAAAGCATGTTGTAG 654 0.4281 MDPVMVGNGHGHGSKVSTLDLLRLNGTNDIEKATDNFHASRIPGEGVFGLVYSGILEDGMKVAFKVLKREDPHGDHEFLAEVEMLSRLHHRNLVKLIGVDREISPLDWGARMKIALGAAPGLAYLHEDSSPRVIHRDFKSSNILLDWLERNNRTSDEFESMTISALGQKSKPIIQQDLAESGSYRRNSYSVHNLNFAKRHSLLGYESLIRLRNKSML* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0461 217 Pfam Protein tyrosine and serine/threonine kinase 44 99 IPR001245 GO:0004672|GO:0006468
Gso17g0461 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gso17g0461 217 Gene3D Transferase(Phosphotransferase) domain 1 103 171 - -
Gso17g0461 217 PANTHER OS01G0750732 PROTEIN 27 99 - -
Gso17g0461 217 PANTHER OS01G0750732 PROTEIN 96 158 - -
Gso17g0461 217 PANTHER OS01G0750732 PROTEIN 27 99 - -
Gso17g0461 217 PANTHER OS01G0750732 PROTEIN 96 158 - -
Gso17g0461 217 Gene3D Phosphorylase Kinase; domain 1 12 102 - -
Gso17g0461 217 ProSiteProfiles Protein kinase domain profile. 37 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0461 217 SUPERFAMILY Protein kinase-like (PK-like) 19 146 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0461 Gso-Chr17 4169724 4171684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0461 28 146 Receptor kinase-like Gene Family AT5G56890 61.379 9.17e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso17g0461 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0461 - - gsj:114393501 436.417