Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0445 ATGAAGCGGTCATGTAGTTCGAGTGGTTGTTACTTTTGGTTAATGAATATGAATATGTTCCTGTTGCTTTTGGCAGTAAAGTCTGAACTGACAACAGACTTCTATAAGTCATCATGTCCTAACGTTTCCAAAATAGTAAGGAGAGAGGTTAAAAAAGCTCTCACGAATGAGATGCGAATGGCTGCTTCTTTGCTTCGTCTTCACTTTCATGATTGCTTTGTGAATGGTTGTGATGGATCAATACTACTAGATGGTGGTGATGATGGAGAGAAGTCTGCCGTTCCTAACCTGAACTCTGCCAGAGGATATGATGTTGTAGATACAATCAAAAGTTCAGTGGAGAGTGAATGTGACGGGGTTGTCTCATGTGCTGATATATTAGCCATCGCTGCCAGAGATTCTGTTTTCCTGAGTGGTGGTCCTTCTTGGAAGGTTCTGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACTCTAGCAAATGAGGCGCTTCCTGCACCATTTGATCCATTGGATACCATCATTTCAAAGTTTGCTAATATGGGCCTTAATCTCACAGATGTTGTTTCTTTATCAGACTATGAAGATGGAACTTTAATACTGATTAAAGAATTACACCAACAACTCGTAAAAAACTGTGCCCATACTATTGGCCGTGCAAGGTGTACACTGTTTAGCAATAGATTGTCCAACTTCTCCGGAACAGGTGCACCAGACAGTACACTAGACACTGACATGCTCTCTGACCTGCAAAGTTTGTGTCCTCAAAATGGAGATGGAAACGTTACTACAGTCCTTGATCGGAACTCATCGGATCTATTTGACAATCACTACTTCGAGAACTTGCTCAGTGGAAAGGGGCTTCTCAGTTCTGACCAGATTCTATTTTCTAGTGATGAAGCTAATTCAACCACTAAACCTTTAGTTCAAAGTTATAGCAACGATAGTGGACTCTTCTTTGGGGACTTTGCCAATTCTATGATCAAGATGGGGAATATAAATATTAAGACTGGGACTGATGGGGAGATTAGGAAAAACTGCAGAGTGATAAATTCTTAG 1059 0.4108 MKRSCSSSGCYFWLMNMNMFLLLLAVKSELTTDFYKSSCPNVSKIVRREVKKALTNEMRMAASLLRLHFHDCFVNGCDGSILLDGGDDGEKSAVPNLNSARGYDVVDTIKSSVESECDGVVSCADILAIAARDSVFLSGGPSWKVLLGRRDGTVSNGTLANEALPAPFDPLDTIISKFANMGLNLTDVVSLSDYEDGTLILIKELHQQLVKNCAHTIGRARCTLFSNRLSNFSGTGAPDSTLDTDMLSDLQSLCPQNGDGNVTTVLDRNSSDLFDNHYFENLLSGKGLLSSDQILFSSDEANSTTKPLVQSYSNDSGLFFGDFANSMIKMGNINIKTGTDGEIRKNCRVINS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0445 352 PANTHER PEROXIDASE 59 14 192 - -
Gso17g0445 352 PANTHER PEROXIDASE 59 213 350 - -
Gso17g0445 352 SUPERFAMILY Heme-dependent peroxidases 30 351 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 Gene3D - 34 351 - -
Gso17g0445 352 Gene3D Peroxidase, domain 2 165 330 - -
Gso17g0445 352 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Gso17g0445 352 ProSiteProfiles Plant heme peroxidase family profile. 29 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PANTHER PEROXIDASE 72-RELATED 14 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PANTHER PEROXIDASE 72-RELATED 213 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 Pfam Peroxidase 46 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 CDD secretory_peroxidase 29 350 IPR033905 GO:0004601|GO:0042744
Gso17g0445 352 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0445 352 PRINTS Plant peroxidase signature 325 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0445 Gso-Chr17 4034469 4037191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0445 1 351 Peroxidase AT5G19890 56.410 1.78e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0445 K00430 - gmx:100814964 610.527