Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0444 ATGAAGCGGCCATGTAGTTCCAGCGGTTATTACTTTTGTCTAATGAATATGTTCCTGTTGCTTTTGCCAGTAAGGTCCCAACTGACAACAGACTTCTATAAGTCATCATGTCCTAACCTTTCCAAAATAGTAAGAAGAGAGGTTCAAAAAGCTCTAATGAATGAGATTCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTGAATGGTTGTGATGGATCGATACTACTAGATGGTGGTGATGATGGAGAGAAATCTGCTGCTCCTAACCTGAACTCTGCTAGAGGATATGAGGTTGTAGATACAATCAAAAGTTCAGTGGAGAGTGCATGTAGTGGGGTTGTCTCCTGTGCTGATATATTAGCCATTGCTGCCAGAGATTCTGTTTTCCTAAGTGGTGGTCCTTTTTGGAAGGTTCCGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACACTGGCAACTGAGGTGCTTCCAGCGCCATTTGATCCATTGAATACCATCATTTCAAAGTTTACTAATATGGGCCTTAATCTCACTGACGTTGTTTCTTTATCAGGTGCCCATACAATTGGCCGAGCAAGGTGTACACTGTTTAGCAATAGATTATTCAACTTCTCAGGAACAGGTGCACCAGACAGCACACTAGAAACTGGCATGCTCTCTGACCTGCAAAGTTTGTGTCCTCAAAATGGAGATGGAAATGTTACTACAGTCCTTGATCGGAATTCATCGGATCTATTTGACATTCACTACTTCAAGAACCTGCTCAGTGGAAAGGGGCTTCTCAGTTCTGACCAGATTCTATTTTCTAGTGATGAAGCTAATTCAACAACAAAACCTTTAGTCCAAAGCTATAGCAACGATAGTGGACAATTCTTTGGGGACTTTGCCAACTCTATGATCAAGATGGGGAATATAAATATTAAGACTGGGACTGATGGAGAGATTAGGAAAAACTGCAGAGTGATAAATTCTCAGTAA 996 0.4167 MKRPCSSSGYYFCLMNMFLLLLPVRSQLTTDFYKSSCPNLSKIVRREVQKALMNEIRMAASLLRLHFHDCFVNGCDGSILLDGGDDGEKSAAPNLNSARGYEVVDTIKSSVESACSGVVSCADILAIAARDSVFLSGGPFWKVPLGRRDGTVSNGTLATEVLPAPFDPLNTIISKFTNMGLNLTDVVSLSGAHTIGRARCTLFSNRLFNFSGTGAPDSTLETGMLSDLQSLCPQNGDGNVTTVLDRNSSDLFDIHYFKNLLSGKGLLSSDQILFSSDEANSTTKPLVQSYSNDSGQFFGDFANSMIKMGNINIKTGTDGEIRKNCRVINSQ* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0444 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gso17g0444 331 Gene3D Peroxidase, domain 2 163 308 - -
Gso17g0444 331 PANTHER PEROXIDASE 59 11 328 - -
Gso17g0444 331 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Gso17g0444 331 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gso17g0444 331 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PANTHER PEROXIDASE 72-RELATED 11 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 Gene3D - 32 329 - -
Gso17g0444 331 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0444 331 Pfam Peroxidase 44 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0444 Gso-Chr17 4028544 4031524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0444 24 330 Peroxidase AT5G19890 64.821 1.09e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0444 K00430 - gmx:100817622 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0768 13 22009712 22012678 Gso17g0444 17 4028544 4031524 GST