Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g0424 | ATGGGTGATTTCCAAGGCCCCTTCATAGTGTCACCCCCTCCTTCACTCTCTTCCTCGGATAAATCCAGCACAACCATGCTATACTATGGGCTAGTAGTGGTGGGGATTGCAGCCATGGCATTAGCCCTATATAACTTCATCATCATCAAACGAAGTAGAAGGCGCCATATGCAATCACAGGCTGCAGGGGCAAATGGGTTGGTGGAGGGGGCGGTGATGGAAAGTAGTGGAACTGAGAACTGCCAAAGGAACAACTTCAACATGCTCTCAAGCTTCAAGTACAAGAAAGAAGGAATTGGAAATGATGGTGATTATGATTATGAATGCCCAGTTTGCTTATCGGGTTTTGAAGAAGGTGAAGAAGTGAGGAAGCTGCCACGGTGCAAGCACTGGTTCCACGCACCGTGCATAGACATGTGGCTCTACTCTCATCTCGATTGCCCAATTTGTCGAACACCTGTTGGGCAATTCTGTCACCGTTTCCATTCTGGTCTGGGGTTACTGGAATCCAGTGGTGGTGGTGGCGGTGGCGGTGGCGTCTCGGTAGTATGA | 552 | 0.4946 | MGDFQGPFIVSPPPSLSSSDKSSTTMLYYGLVVVGIAAMALALYNFIIIKRSRRRHMQSQAAGANGLVEGAVMESSGTENCQRNNFNMLSSFKYKKEGIGNDGDYDYECPVCLSGFEEGEEVRKLPRCKHWFHAPCIDMWLYSHLDCPICRTPVGQFCHRFHSGLGLLESSGGGGGGGGVSVV* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g0424 | 183 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 155 | IPR013083 | - | |
Gso17g0424 | 183 | PANTHER | RING-H2 FINGER PROTEIN ATL52-LIKE | 11 | 157 | - | - | |
Gso17g0424 | 183 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 11 | 157 | IPR044675 | - | |
Gso17g0424 | 183 | ProSiteProfiles | Zinc finger RING-type profile. | 109 | 151 | IPR001841 | - | |
Gso17g0424 | 183 | SMART | ring_2 | 109 | 150 | IPR001841 | - | |
Gso17g0424 | 183 | Pfam | Ring finger domain | 108 | 151 | IPR001841 | - | |
Gso17g0424 | 183 | SUPERFAMILY | RING/U-box | 103 | 157 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g0424 | Gso-Chr17 | 3868067 | 3868618 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g0424 | 31 | 154 | C3H Transcription Factor Family | AT5G17600 | 38.462 | 1.53e-19 | 82.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g0424 | - | - | gmx:102668514 | 330.102 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso13g0787 | 13 | 22212190 | 22212732 | Gso17g0424 | 17 | 3868067 | 3868618 | GST | |
Gso17g0424 | 17 | 3868067 | 3868618 | Gso15g1431 | 15 | 16057419 | 16058195 | PCT | |
Gso15g1431 | 15 | 16057419 | 16058195 | Gso17g0424 | 17 | 3868067 | 3868618 | PCT |