Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0411 ATGCCTTCCATTTCTTCCACAATTCACGCGCCACAATTCCATAGTTCATTCTTCCGCCCCTATCCCAAATGCTTGGCCATGACCATCGACACTGACTTCTTGAACACGAAGAAGAAACAAGTTTCGTTCCAACTTTCGAGTTTGATCACACCACCTGTCTCCACTGTGAGGTTCTGCGATCTCAACTTTGGCCGCTTGCAACCTTCCGATGAAGAATTGGGTCCTCACAAAAGATTTGAGTTTGGCAACTTCGTTGCACGAGAAGCCCTGCTTGAGGAAGAGTATTGGTCTGCAGCGTGCCTAAGGGCAGAAGAGTGGGCAAATCGAACAGATAAACTATATGTTGTTGATCGGCAGAGGAATTTTGCTGAACAGGAATTTAATGCGATAAAAAAGCGGTGCAAGGAGCTACAAGACGGTCACAGTAGCACATGCATCATCACGGTTAGGAAGCCACAAAAGAATGTAAAACTCCCAATAATAGAAAGTGTTGTAGGAACTCTTGATTTGAATATCATATATTTGCGGCGAGGGGAGACCTTTCCTGGGATCGACCGAACAGCATCAAGCAGATATGGTTATATTGCAAACTTGTGTGTTGCCAAATCACTTTATCGCAAGGGTGTTGCAAGCAAAATGTTGTATTTTGCTGTGGAGTCTGCAAAATCTACTGGTGTGTCACGTGTGTATGCGCATGTGGACAGAAACAATAAACCTGCCCAAATATTATACCAAAACTTAGGGTTTGAGATAATTGACACTGCAAACCCCCTGTTGTTGAAAAATCAAACATCCTTGCTTTTCTTACAGATGTAG 816 0.435 MPSISSTIHAPQFHSSFFRPYPKCLAMTIDTDFLNTKKKQVSFQLSSLITPPVSTVRFCDLNFGRLQPSDEELGPHKRFEFGNFVAREALLEEEYWSAACLRAEEWANRTDKLYVVDRQRNFAEQEFNAIKKRCKELQDGHSSTCIITVRKPQKNVKLPIIESVVGTLDLNIIYLRRGETFPGIDRTASSRYGYIANLCVAKSLYRKGVASKMLYFAVESAKSTGVSRVYAHVDRNNKPAQILYQNLGFEIIDTANPLLLKNQTSLLFLQM* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0411 271 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 117 271 IPR000182 GO:0016407
Gso17g0411 271 CDD NAT_SF 183 232 - -
Gso17g0411 271 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 34 271 - -
Gso17g0411 271 Coils Coil 120 140 - -
Gso17g0411 271 Gene3D - 89 263 - -
Gso17g0411 271 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 34 271 - -
Gso17g0411 271 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 164 254 IPR016181 -
Gso17g0411 271 Pfam Acetyltransferase (GNAT) family 152 249 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0411 Gso-Chr17 3761612 3763758 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso17g0411 Acetyltransf_1 7.2e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0411 - - gmx:100800028 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0411 17 3761612 3763758 Gso17g0411 17 3761612 3763758 ECH
Gso13g0800 13 22320832 22322854 Gso17g0411 17 3761612 3763758 GST
Gso17g0411 17 3761612 3763758 Gso15g1468 15 16923633 16933347 PCT
Gso17g0411 17 3761612 3763758 Gso9g0585 9 6945830 6949222 PCT
Gso15g1468 15 16923633 16933347 Gso17g0411 17 3761612 3763758 PCT
Gso9g0585 9 6945830 6949222 Gso17g0411 17 3761612 3763758 PCT