Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0403 ATGGACTCATCAATTTCCCTTTACTTCTTCTCCTTCTTTCTCCTCCAACTCACACTACTATCTGCGACCAAGAAGACTTACATAGTACACATGAAACACCGCCACGATTCCACCGTGCACCCCACGCACCGTGACTGGTACACTGCCACACTCGATTCTTCTCCAGACTCTCTCCTCTATGCCTACACCGCCGCTTACAACGGCTTCGCTGCCACTCTCGACCCTCAACAAGCCCACGCGCTTCGAGCTTCCCATTCCGTCTTGGCCGTCTACGAAGACACGCGCTACACGCTTCACACCACTCGCACCCCCGAGTTCCTGGGCCTTCAGGCCCATTCCGCCTTCTGGCAAGACCTCCACCAGGCCTCACACGACGTCGTCATCGGTGTCCTCGACACTGGCGTCTGGCCCGAATCGCAAAGCTTCGACGACTCTCAAATGCCGCAAATCCCCACGCGCTGGCGCGGTAACTGCGAGTCCGCACCTGACTTCGACCCTTCTCTCTGTAACAACAAACTCATCGGAGCTCGCAGTTTCTCCAAGGGCTACCGCATGGCCTCTAGTAACGCTAGAAAAACCAGAGACCCTGCTACCCCGCGTGACCTTGACGGCCACGGCACGCACACCGCCTCCACCGCCGCTGGCTCCGCCGTCGCCAACGCCACGCTCCTCGGCTACGCCACCGGCACTGCTCGCGGGATGGCGCCACAGGCGCGCGTGGCGGCCTATAAGGTCTGCTGGACCGGCGGCTGCTTCGCCTCCGACATTCTCGCCGGAATGGATCAGGCAATCCAGGACGGCGTCGATGTCCTCTCGCTCTCCCTCGGAGGCTCCTCCTCCGTCCCTTACTACTTCGACACCATCGCCATCGGAGCCTTCGCGGCGTTGGAGAGAGGCATCTTCGTCGCCTGCTCCGCGGGGAATACCGGACCTCGCGGCGGTTCTGTCGCGAATGTCGCTCCGTGGATCATGACCGTCGGAGCCGGCACTCTGGACCGTGATTTTCCGGCGTACGCCACTCTCGGGAACGGAAAACGCTTCGCCGGAGTTTCGCTCTACAGTGGAGAAGGGATGGGAGACGAACAGGTTGGTTTGGTTTATTTCAGCGACCGGTCGAACTCGTCGGGCAGCATTTGCATGCCGGGTTCGCTCGACGCGGAGAGCGTGCGCGGGAAGGTGGTGATTTGTGACAGGGGACTCAACTCGCGCGTGGAGAAGGGTGCGGTGGTGCGCGACGCCGGCGGGGTTGGGATGATACTCGCCAACACGGCGGCGAGCGGGGAGGGACTGGTGGCCGATAGTCACTTGGTGGCCGCCGTGGCGGTGGGGGAATCAGCGGGAGATGAGATCAGAGAGTACGCGTCGTTGGATCCTAATCCAACCGCTGTACTGAGCTTCGGTGGGACCGTGTTGAACGTGAGGCCCTCGCCAGTAGTAGCAGCGTTCAGCTCCCGAGGGCCGAATGGAGTCACGGCCCAAATACTAAAACCGGATGTTATTGGGCCTGGAGTGAACATATTAGCGGGATGGTCGGGGGCGGTTGGCCCATCAGGCACAGAAGACAGTCGCAAAACTAACTTTAACATTATGTCTGGTACTTCCATGTCCTGTCCCCACATAAGTGGTTTGGCTGCGTTGTTGAAAGCAGCACATCCAGATTGGAGTCCAAGTGCGATCAAATCAGCACTGATGACAACGGCTTATACCAATGACAACACAGAGTCACCAATTCGTGATGCAAAGGGAGAAGAAACCATCTCCACACCATGGGCCTATGGGGCCGGTCATGTCAACCCACAAAAGGCCCTATCTCCTGGGCTTGTTTATGAAGCCTCCACCCAAGACTACATTGCGTTTTTGTGCTCCTTGAACTACACGCTCGACCATCTCAGACTTGTTGTGAAGGATCCTGATGCCAATTGCTCAAAAAAATTCGCTGACCCGGCCGAGCTCAACTATCCATCCTTCTCGCTTGTTTTCGGAAGCAACAAGCTTCTTCGATACACGCGCACCTTGACCAACGTGGGGGAGCCGGGATCTGTCTATGATCTGGTGCTCAGCGTGCCATCCACGGTCCACGTCACCGTCAACCCTAGAAGGCTTCAGTTTCGACAACTAGGGGAAAGCCAAACCTACACGGTCACGTTTCTCTCTAATAGGACTCTTAATGATTCCGTTACTTCTGATTTTGGTACTATTATGTGGACCAATCAACTACACCAAGTTAGGACCCCGCTTGCTTTTACATGGACATATTTTTGA 2262 0.5698 MDSSISLYFFSFFLLQLTLLSATKKTYIVHMKHRHDSTVHPTHRDWYTATLDSSPDSLLYAYTAAYNGFAATLDPQQAHALRASHSVLAVYEDTRYTLHTTRTPEFLGLQAHSAFWQDLHQASHDVVIGVLDTGVWPESQSFDDSQMPQIPTRWRGNCESAPDFDPSLCNNKLIGARSFSKGYRMASSNARKTRDPATPRDLDGHGTHTASTAAGSAVANATLLGYATGTARGMAPQARVAAYKVCWTGGCFASDILAGMDQAIQDGVDVLSLSLGGSSSVPYYFDTIAIGAFAALERGIFVACSAGNTGPRGGSVANVAPWIMTVGAGTLDRDFPAYATLGNGKRFAGVSLYSGEGMGDEQVGLVYFSDRSNSSGSICMPGSLDAESVRGKVVICDRGLNSRVEKGAVVRDAGGVGMILANTAASGEGLVADSHLVAAVAVGESAGDEIREYASLDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTAQILKPDVIGPGVNILAGWSGAVGPSGTEDSRKTNFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTNDNTESPIRDAKGEETISTPWAYGAGHVNPQKALSPGLVYEASTQDYIAFLCSLNYTLDHLRLVVKDPDANCSKKFADPAELNYPSFSLVFGSNKLLRYTRTLTNVGEPGSVYDLVLSVPSTVHVTVNPRRLQFRQLGESQTYTVTFLSNRTLNDSVTSDFGTIMWTNQLHQVRTPLAFTWTYF* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0403 753 SUPERFAMILY Subtilisin-like 98 607 IPR036852 GO:0004252|GO:0006508
Gso17g0403 753 Pfam PA domain 386 450 IPR003137 -
Gso17g0403 753 PANTHER CUCUMISIN-RELATED 16 750 - -
Gso17g0403 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Gso17g0403 753 SUPERFAMILY Protease propeptides/inhibitors 25 97 - -
Gso17g0403 753 Pfam Subtilase family 124 573 IPR000209 GO:0006508|GO:0008236
Gso17g0403 753 PRINTS Subtilisin serine protease family (S8) signature 123 142 IPR015500 -
Gso17g0403 753 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Gso17g0403 753 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Gso17g0403 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 750 IPR045051 -
Gso17g0403 753 CDD PA_subtilisin_like 338 462 - -
Gso17g0403 753 CDD Peptidases_S8_3 96 568 IPR034197 -
Gso17g0403 753 Pfam Peptidase inhibitor I9 26 99 IPR010259 -
Gso17g0403 753 Gene3D - 620 750 - -
Gso17g0403 753 ProSiteProfiles Serine proteases, subtilase domain profile. 95 603 - -
Gso17g0403 753 Pfam Fibronectin type-III domain 650 747 IPR041469 -
Gso17g0403 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 99 IPR037045 -
Gso17g0403 753 MobiDBLite consensus disorder prediction 185 209 - -
Gso17g0403 753 Gene3D Peptidase S8/S53 domain 125 616 IPR036852 GO:0004252|GO:0006508
Gso17g0403 753 Gene3D - 332 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0403 Gso-Chr17 3697474 3700232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0403 10 753 Subtilisin-like Serine Gene Family AT2G05920 63.588 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0403 - - gmx:100797924 1450.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0403 17 3697474 3700232 Gso17g0403 17 3697474 3700232 ECH
Gso13g0807 13 22389578 22392283 Gso17g0403 17 3697474 3700232 GST
Gso17g0403 17 3697474 3700232 Gso9g0589 9 7029970 7032819 PCT
Gso9g0589 9 7029970 7032819 Gso17g0403 17 3697474 3700232 PCT