Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0400 ATGGCAATTTCAGGGTCAGAGACTCAGAGTCCTTTAGTGAAAAGCGTTTCTCAGGTGGAAGTTGAGTGTGTGAAATGCGACTCGTGCGGGTTCACAGAGGAATGCACCCCTGCGTACATCACGAGGGTGCGTCAGAGGTACCAGGGTCGCTGGCTCTGTGGGCTGTGCGTGGAGGCTGTGAAGCACGAGGTGGTGAGATCAGACAGTGTCATCACCACGGAAGAAGCGCTGGACCGTCACATCAGCTTCTGCAGAGAGTTCAGATCATCGACGGTTACCAATAATAAAACAGAGCACCCCATCTTCGCCATGGGACGCGTCCTCCGGAGGAGCCTCGACTCTCCCAGGCCTCTCCGATCGAACTCCAGTGGGGCTCTCCCGTCCGTGGACGGGGTTCGAGCCCCACACTTGCTTCGATCGGAGAGTTGCTTCTCTTCTATCTCGGGTTAA 450 0.5622 MAISGSETQSPLVKSVSQVEVECVKCDSCGFTEECTPAYITRVRQRYQGRWLCGLCVEAVKHEVVRSDSVITTEEALDRHISFCREFRSSTVTNNKTEHPIFAMGRVLRRSLDSPRPLRSNSSGALPSVDGVRAPHLLRSESCFSSISG* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0400 149 PANTHER OS01G0745000 PROTEIN 1 148 IPR012876 -
Gso17g0400 149 PANTHER DUF1677 FAMILY PROTEIN 1 148 - -
Gso17g0400 149 Pfam Protein of unknown function (DUF1677) 21 110 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0400 Gso-Chr17 3666702 3667566 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0400 - - gmx:100797385 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0400 17 3666702 3667566 Gso14g0927 14 11701737 11702591 ECH
Gso17g0400 17 3666702 3667566 Gso17g0400 17 3666702 3667566 ECH
Gso13g0810 13 22426890 22428103 Gso17g0400 17 3666702 3667566 GST