Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0385 ATGCAAACACAACGAGTTAACACTCTCGCACTTTTCCTCTTGTTGTTGCTCTCTCCGCCACGCCCCGCCGCATCAATGCCACCACGAGATCCGCTCCGGTCATCGTGCGCAAAGGCCAGGTACCCAACTCTCTGCTTCCAAACCCTCTCCAACTTCTCAAACCTCGCCACGAAGCCCTTGGACCTAGCCCAAGCCGCGATCAAGGTTAGCCTGGCTCGCACGCGCACCCTCTCCGTTTACTTCAAGACGCTGAATGCCACGTCGTCGCGTTTCGGGAAGAGGCAGCGAGTTGCGGTGAGTGACTGCGTGGAGCAGATATCCGACTCGGTGACTCAGTTGATCAACACGCTCAACGAGTTGCAGCACCTCCGCGCCGGAACCTTCCAGTGGCAGATGAGCAACGCTCAGACGTGGACCAGCGCCGCCCTCACCAACGGTGACACTTGCCTCAGCGGCTTCAACGACGGCGGCGCCACCGCGGACGGTGCTAAAATCAAGTTGGAGGTGAAGCGAAGGATCACCGACGTTGCCATGCTCACCAGTAACGCGTTGTATCTCATCAATCGCCTCGGTGATGATAGCGTGAGTGGGAAGCCTCGCACTGATTTCGGAAACTGA 618 0.5809 MQTQRVNTLALFLLLLLSPPRPAASMPPRDPLRSSCAKARYPTLCFQTLSNFSNLATKPLDLAQAAIKVSLARTRTLSVYFKTLNATSSRFGKRQRVAVSDCVEQISDSVTQLINTLNELQHLRAGTFQWQMSNAQTWTSAALTNGDTCLSGFNDGGATADGAKIKLEVKRRITDVAMLTSNALYLINRLGDDSVSGKPRTDFGN* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0385 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 191 IPR035513 -
Gso17g0385 205 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 190 IPR006501 GO:0004857
Gso17g0385 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 200 - -
Gso17g0385 205 Pfam Plant invertase/pectin methylesterase inhibitor 32 185 IPR006501 GO:0004857
Gso17g0385 205 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 5 200 - -
Gso17g0385 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 190 IPR035513 -
Gso17g0385 205 SMART PMEI_2 27 186 IPR006501 GO:0004857
Gso17g0385 205 CDD PMEI-like_3 34 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0385 Gso-Chr17 3511770 3512771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0385 32 196 Carbohydrate Esterase AT3G14310 30.588 9.14e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0385 - - gmx:100810705 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0385 17 3511770 3512771 Gso17g0385 17 3511770 3512771 ECH