Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0380 ATGGAAGATGCTGGAGGTTCCAAATTGCATGGAATTAAGCAGATTGTGAGATTGAAGGAAATATTTCAGAAGTGGCAAACTGTAACTCTGGGCTCAAAAGATTCCAACAATCATTCTGATGTGACTCGTCATCATGGGGGCATATCACCAATGATTAACAAAAGGCTAACAAATATTGTGTATTGTGACTCTGATGAGGATGGTTGCTACAGCCCTCAACCACCACATGATGTTCCCAAAGGGTACTTAGCCGTCTATGTTGGGCCTGAGCTTCGGAGGTTTATCATTCCCACAACCTACCTTAGCCACCCTTTGTTCAAGGTTTTGCTGGAAAAAGCTGCAGAGGAATTTGGGTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAGACCTTTAAATACCTCTTGAATTGCATAGAGAACCATGATGACAGCTCCAACTCTTGGTGGAATTGCAGCTGGAAACACAGGAACTGTGGAAGAATAACTAATTGGTCTGATCTTTATAGAGGTGCAATCATAGTGCTGGTTTCAAGTGTAAGGAAGGTTTCCTTTGCTTCTATCTTCATTGTTATGATTTCTTGCGTGAACAATGATAGAATACCCCATTTAGAAAGATTTCTGATGCCTTATTTGCTTGTAGAACAGTTGTTAAACATCTATGTACTTTTCATCCAATGTTCTCCTAATACATGTACTTTGCCAACATATTCAAATAGAAAATTTTTGACATTTAATGTACCATTTTCCACTAAGGGATGCGAAAATGTGTGTTTCATTTTTGGGTTTGAAGTAATTGATTTTCAATTGTATGATTCTCAACCATCATTCTCGTGA 843 0.3879 MEDAGGSKLHGIKQIVRLKEIFQKWQTVTLGSKDSNNHSDVTRHHGGISPMINKRLTNIVYCDSDEDGCYSPQPPHDVPKGYLAVYVGPELRRFIIPTTYLSHPLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCIENHDDSSNSWWNCSWKHRNCGRITNWSDLYRGAIIVLVSSVRKVSFASIFIVMISCVNNDRIPHLERFLMPYLLVEQLLNIYVLFIQCSPNTCTLPTYSNRKFLTFNVPFSTKGCENVCFIFGFEVIDFQLYDSQPSFS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0380 280 PANTHER SMALL AUXIN-UP RNA-RELATED 7 186 - -
Gso17g0380 280 Pfam Auxin responsive protein 69 141 IPR003676 GO:0009733
Gso17g0380 280 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 186 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0380 Gso-Chr17 3473654 3475741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0380 1 148 Calmodulin-binding Proteins AT3G43120 69.536 2.14e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0380 K14488 - gmx:100795275 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0380 17 3473654 3475741 Gso17g0380 17 3473654 3475741 ECH
Gso13g0834 13 22640458 22642462 Gso17g0380 17 3473654 3475741 GST
Gso17g0380 17 3473654 3475741 Gso15g1502 15 17916713 17921151 PCT
Gso17g0380 17 3473654 3475741 Gso9g0622 9 7615576 7618591 PCT
Gso15g1502 15 17916713 17921151 Gso17g0380 17 3473654 3475741 PCT
Gso9g0622 9 7615576 7618591 Gso17g0380 17 3473654 3475741 PCT