Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0379 ATGGCAAGAGGTGGAAAACTAATGAAGCTAAAATCAGTGCTGAAGAAATGGAACTCATTCGGCAATGGCAGCAAGCATAGCCGCCACCACAGCAGCAGCGCCGTCGCCGATGACGAGTCCTCCTCCAGATCAGACCTCCACGCCGTCTACGTCGGCAAGTCCCGCCGCCTCTATCGCGTCTCCTCCGACGTTGTCGACCACCCCGTCTTCCGGGAACTCGTCGAGAGATCCCGCGATTCCGACCAACAACAAAACGAAGACACTACTACGATCAATGTCGTCGCATGCGAGGTTGTCCTTTTCGAACACTTGCTCTGGATGCTCGATAACGCCGACCCACAACCCGAGTCACTCAACGAACTCGTCGACTTCTACGCTTGCTAA 384 0.5521 MARGGKLMKLKSVLKKWNSFGNGSKHSRHHSSSAVADDESSSRSDLHAVYVGKSRRLYRVSSDVVDHPVFRELVERSRDSDQQQNEDTTTINVVACEVVLFEHLLWMLDNADPQPESLNELVDFYAC* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0379 127 MobiDBLite consensus disorder prediction 30 45 - -
Gso17g0379 127 MobiDBLite consensus disorder prediction 19 45 - -
Gso17g0379 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 127 IPR003676 GO:0009733
Gso17g0379 127 PANTHER SMALL AUXIN-UP RNA-RELATED 4 127 - -
Gso17g0379 127 Pfam Auxin responsive protein 11 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0379 Gso-Chr17 3455830 3456781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0379 5 112 Calmodulin-binding Proteins AT4G34750 25.000 5.23e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0379 - - gmx:100792286 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0379 17 3455830 3456781 Gso17g0379 17 3455830 3456781 ECH