Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0369 ATGGCGTTTCAGGACTTTGATCTCATCTCAGAGAGGAGAAGGAACGAGAAGAGGCAAAAGGCGAGGAAGAGGATCATGATTGGCGTGGTCTCTTCCGTTGTCCTCGTTGCCATGATAGGTGCAGTACTCTTCGTTGTGGTTAGAAACGACAACGAAGCAGGCAACAAAAAAAGCAATGAAAACAAGTCACATGGCCATTCACAACAATCTACCACCCCCGGCAAGGATCACGTTGTGGCGCATTCGAAGATGGTGAAATTGGTGTGCAGCTCCGCGGACTACAAGGAAAAATGTGAAGACCCTCTTAACAAGGCAATGGAGGATGACCCCAAACTCACGCAACCAAAAGACCTTCTCAAGGCATATGTCAAATTTGCTGAGGATGAGGTTAGCAAGGCCTTCAACAAAACCATCTCCATGAAGTTTGAAAATGAGCAAGAGAAAGGTGCATTTGAAGATTGCAAGAAGCTCTTTGAGGATGCCAAGGACGACATTGCAACCTCCATATCCGAACTTGAAAAAATTGAGATGAAGAACCTTTCTCAAAGGACTCCTGATTTCAACAGCTGGCTCAGTGCTGTCATCTCCTTCCAACAGAATTGTGTTGATGGCTTTCCCGAGGGAAACACAAAGACTGAACTTCAGACTCTCTTCAACGATTCCAAGGAATTCGTTAGCAACTCCCTTGCCATTCTGTCTCAGGTTGCATCGGCTCTTTCAACAATCCAAACACTAGCACGCGGCAGCCGTTCGTTGCTGTCTGAGAACAGCAACTCCCCAGTTGCTTCTCTAGACAAAGCTGATGGCCTTCCTTCTTGGATGAACCATGAGGACCGAAGGGTATTGAAGGCTATGGATAACAAACCTGCACCTAATGTCACCGTGGCTAAAGATGGCAGCGGAGACTTCAAAACCATCTCTGAATGTTTAAATGCTGTCCCTCAAAATTTTGAAGGACGTTATGTGATTTTTGTTAAAGAAGGAGTATACGATGAGACTGTGACCATAACAAAGAAAATGCAAAATATAACCATGTATGGTGATGGATCCCAAAAGAGCATCATCACTGGCAACAAAAACTTTAGGGACGGTGTCAGGACTTTCCTAACTGCAAGTTTTGTGGTAGAGGGAGATGGATTCATAGGCCTAGCAATGGGATTCAGAAACACTGCAGGCCCTGATGGCCACCAAGCAGTGGCTGCAAGAGTGCAGGCGGATCGTGCAGTGTTTGCCAACTGTCGGTTCGAGGGCTACCAAGACACTCTATACACCCAAGCCCACAGACAATTCTACAGGAGCTGCATCGTTACAGGAACAATCGATTTCATCTTTGGCGACGCAGCTGTCGTGTTCCAGAACTGCATCATGGTAGTTAGGAAGCCATTGGAAAACCAGCAGAACATGGTGACTGCTCAAGGGAGAGTCGACAAGCAACAAGTCACTGGAATTGTGCTGCAGAAATGCACAATCAAGGCTGATGATTCACTGGTTCCAGAGAAGGACAAGATCAGGAGCTACCTTGGGAGGCCGTGGAAGGAGTTCTCGAGAACAATTGTGATGGAATCGGAAATAGGTGACTTCATTCACCCCGATGGATGGACAGCTTGGGAGGGAGACTTTGCTCTCAAGACATTGTACTATGCTGAGTATGGCAACACAGGACCTGGTGCCAGCACCAATGCTAGGATCAAGTGGCCTGGTTACCAAGTCATTAACAAGGATGAGGCTAGCCAGTTCACTGTGGGATCTTTCTTGAGAGGCACATGGCTCCAGAACACGGGCGTGCCTGCCACGCAAGGCTTGTACAATTAA 1812 0.4724 MAFQDFDLISERRRNEKRQKARKRIMIGVVSSVVLVAMIGAVLFVVVRNDNEAGNKKSNENKSHGHSQQSTTPGKDHVVAHSKMVKLVCSSADYKEKCEDPLNKAMEDDPKLTQPKDLLKAYVKFAEDEVSKAFNKTISMKFENEQEKGAFEDCKKLFEDAKDDIATSISELEKIEMKNLSQRTPDFNSWLSAVISFQQNCVDGFPEGNTKTELQTLFNDSKEFVSNSLAILSQVASALSTIQTLARGSRSLLSENSNSPVASLDKADGLPSWMNHEDRRVLKAMDNKPAPNVTVAKDGSGDFKTISECLNAVPQNFEGRYVIFVKEGVYDETVTITKKMQNITMYGDGSQKSIITGNKNFRDGVRTFLTASFVVEGDGFIGLAMGFRNTAGPDGHQAVAARVQADRAVFANCRFEGYQDTLYTQAHRQFYRSCIVTGTIDFIFGDAAVVFQNCIMVVRKPLENQQNMVTAQGRVDKQQVTGIVLQKCTIKADDSLVPEKDKIRSYLGRPWKEFSRTIVMESEIGDFIHPDGWTAWEGDFALKTLYYAEYGNTGPGASTNARIKWPGYQVINKDEASQFTVGSFLRGTWLQNTGVPATQGLYN* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0369 603 MobiDBLite consensus disorder prediction 53 77 - -
Gso17g0369 603 Gene3D - 286 601 IPR012334 -
Gso17g0369 603 TIGRFAM PME_inhib: pectinesterase inhibitor domain 78 235 IPR006501 GO:0004857
Gso17g0369 603 CDD PMEI-like_3 87 237 - -
Gso17g0369 603 PANTHER PECTINESTERASE 14 601 - -
Gso17g0369 603 Pfam Plant invertase/pectin methylesterase inhibitor 84 231 IPR006501 GO:0004857
Gso17g0369 603 ProSitePatterns Pectinesterase signature 2. 436 445 IPR033131 -
Gso17g0369 603 PANTHER PECTINESTERASE 14 601 - -
Gso17g0369 603 Gene3D Invertase/pectin methylesterase inhibitor family protein 81 238 IPR035513 -
Gso17g0369 603 SUPERFAMILY Pectin lyase-like 289 600 IPR011050 -
Gso17g0369 603 Pfam Pectinesterase 292 587 IPR000070 GO:0030599|GO:0042545
Gso17g0369 603 SMART PMEI_2 80 231 IPR006501 GO:0004857
Gso17g0369 603 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 234 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0369 Gso-Chr17 3326772 3329393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0369 1 603 Carbohydrate Esterase AT2G26450 47.536 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0369 - - gmx:100784679 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0369 17 3326772 3329393 Gso17g0369 17 3326772 3329393 ECH
Gso17g0369 17 3326772 3329393 Gso15g1521 15 18336772 18339339 PCT
Gso17g0369 17 3326772 3329393 Gso9g0643 9 8176275 8179447 PCT
Gso15g1521 15 18336772 18339339 Gso17g0369 17 3326772 3329393 PCT
Gso9g0643 9 8176275 8179447 Gso17g0369 17 3326772 3329393 PCT