Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0367 ATGAACACAAGAGATAGTTCTCTCGTTCTACTCAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAAATCCGTTGTCAAGGAACGATTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCAAAATTGACCCTCAAGCGCTTAAATATGGAGGCTAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTTGGACTCCTGTGCTGTATGCTGTGGATCCTGTGTTGCACACTTTAACATTTGAATATGTTGAGGGCACTTCAGTCAAAGATGTGTTTCTTGAATTTGGGTCACATGGTGTTAATAAAGAGAGGCTGGATGATATTGCATTCCAAATTGGTGATGCAATTGGAAAGCTACATGATGGTGGTCTTATTCATGGTGATTTAACAACATCAAACATGTTACTAAAGAGTGATACAAAGCATTTGGTTCTTATTGATTTTGGTTTGAGCTTCACTTCAACTCTACCTGAAGACAAGGCTGTTGATTTGTATGTTCTAGAAAGAGCTCTTATTGCAATGCATTCATCATGTGGGAATGTGATGGATCAGATACTTGCTGCATACAGGAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCACAAGTGCGACAAAGAGGACGGAAGAGGATCATGGTTGGATGA 669 0.4141 MNTRDSSLVLLKQGAEARVFESSFVGRKSVVKERFSKKYRHPTLDSKLTLKRLNMEARCMTKARRLGVWTPVLYAVDPVLHTLTFEYVEGTSVKDVFLEFGSHGVNKERLDDIAFQIGDAIGKLHDGGLIHGDLTTSNMLLKSDTKHLVLIDFGLSFTSTLPEDKAVDLYVLERALIAMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRIMVG* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0367 222 CDD PKc 13 156 - -
Gso17g0367 222 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 3 222 - -
Gso17g0367 222 SMART serkin_6 5 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0367 222 Gene3D Phosphorylase Kinase; domain 1 16 88 - -
Gso17g0367 222 ProSiteProfiles Protein kinase domain profile. 5 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0367 222 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 3 222 IPR022495 GO:0004674
Gso17g0367 222 Gene3D Transferase(Phosphotransferase) domain 1 102 219 - -
Gso17g0367 222 Pfam Protein kinase domain 38 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0367 222 ProSitePatterns Tyrosine protein kinases specific active-site signature. 129 141 IPR008266 GO:0004672|GO:0006468
Gso17g0367 222 SUPERFAMILY Protein kinase-like (PK-like) 10 170 IPR011009 -
Gso17g0367 222 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 11 216 IPR022495 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0367 Gso-Chr17 3301915 3305400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0367 36 156 MAP Kinase Kinase Kinase AT5G66710 29.839 4.70e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso17g0367 Pkinase 3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0367 K08851 - gmx:100813383 430.639