Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0360 ATGGGTCTAGACAAAGCTTTTGCTGCAAAGAAGATAGGATTTGCTGCGAGCAAAGGTAAGAACTTGAGCATGGCTAGAGAAATTCAAACCCTTGGGAAAATTCGGCATCGAAATCTGGTAAAATTGAAAGACTTTTGGTTGAGAAAATATTATGGTATAATTTTGTTCAGCAACATGGCAAATGGAAGTCTTGACGATGTTTTGCATGGAAAGACACCACCACTAACCTTAGAGTGGAATGTCAGGAATAAGATAACTGTTGGAATTGCTCATGGATTGGTTTATCTCCATTATGACTGCGATCCTCCCATATTGCACCGAGACATCAAGCCAAGCAATATACTTCTCGACTCTGATATGGAGCCTCACATTGTTGACTTTGGTATTGCCAAACTTCTGGATCAATCTTCTTCTGCTTCCGATGCTTCTTCCATTTATGTTCCGAGTACAATTGGTTATATTGCACCATGTTGGAATTCAGAGGAGAAAAGTTTTAGAAACCCTAATTCGAGGAAGAAGAAGCAGTGTTACTTTTAA 537 0.3929 MGLDKAFAAKKIGFAASKGKNLSMAREIQTLGKIRHRNLVKLKDFWLRKYYGIILFSNMANGSLDDVLHGKTPPLTLEWNVRNKITVGIAHGLVYLHYDCDPPILHRDIKPSNILLDSDMEPHIVDFGIAKLLDQSSSASDASSIYVPSTIGYIAPCWNSEEKSFRNPNSRKKKQCYF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0360 178 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 157 - -
Gso17g0360 178 SUPERFAMILY Protein kinase-like (PK-like) 5 156 IPR011009 -
Gso17g0360 178 Gene3D Transferase(Phosphotransferase) domain 1 2 170 - -
Gso17g0360 178 PANTHER OS08G0446200 PROTEIN 4 157 - -
Gso17g0360 178 Pfam Protein kinase domain 5 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0360 178 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0360 178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 104 116 IPR008271 GO:0004672|GO:0006468
Gso17g0360 178 SMART serkin_6 3 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0360 Gso-Chr17 3247687 3248357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0360 1 172 Receptor kinase-like Gene Family AT1G73080 52.601 1.12e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso17g0360 Pkinase 7.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0360 - - gsj:114393494 355.525