Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0359 ATGGCTGGTGTGAACCCCGAGGCAGGAGGGTGGAAGGCTTATCCTTCTGTTATGGAGACTGCTCTTGGTAGTAGTGGTGATGGAAGGCGTGGCCATAACATGAATGATGATGGGTCGGTGATGCATTTCTCTGCTACAAGGCCAGTGGCAGTGCCATCATCTGGACAGAATAAAGTAGTTCCTAGTCCAACTCAGTTTAGCATCCTCTACAAGGGGAAAATGTGTATCTATGAAGGAATTCCTGCAGAAAAGGTGCGTGAAATAATGTTGATTGCTTCTGTCTCTGCTAAGTCTGCTGAAATGAAGAGTGGGATACCCTTGACTTCATTCATTCCCAAAAGCCCTTCTTCTTCACAGGGAAACTCTACTAATTTGCCTTCACCACAATCAGTCAAGAGTTCCATTCGCAGGCTGCAAGATGAATTTCCACTAGCCCGAAGGCAATCACTTCAAAGATTTCTTGAGAAGCGAATAAACAGGTTGGCTAACAGATCCCCTTATGCCTTAACAAAAAAAGTGATTCACAACATAGACAACAACTTTTCTCCTGACGACACGCCAGATTTTGGTTCCTTGAACTTGAACTTTCTTTAA 594 0.4411 MAGVNPEAGGWKAYPSVMETALGSSGDGRRGHNMNDDGSVMHFSATRPVAVPSSGQNKVVPSPTQFSILYKGKMCIYEGIPAEKVREIMLIASVSAKSAEMKSGIPLTSFIPKSPSSSQGNSTNLPSPQSVKSSIRRLQDEFPLARRQSLQRFLEKRINRLANRSPYALTKKVIHNIDNNFSPDDTPDFGSLNLNFL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0359 197 SMART tify_2 59 94 IPR010399 -
Gso17g0359 197 Pfam Jas motif 143 167 IPR018467 -
Gso17g0359 197 ProSiteProfiles Tify domain profile. 59 94 IPR010399 -
Gso17g0359 197 PANTHER DIVERGENT CCT MOTIF PROTEIN 1 184 - -
Gso17g0359 197 Pfam tify domain 61 93 IPR010399 -
Gso17g0359 197 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 184 IPR040390 -
Gso17g0359 197 MobiDBLite consensus disorder prediction 110 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0359 Gso-Chr17 3243895 3246561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0359 63 167 Tify Gene Family AT5G20900 37.838 4.23e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso17g0359 tify 8.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0359 K13464 - gmx:100306655 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0857 13 22895638 22898296 Gso17g0359 17 3243895 3246561 GST
Gso17g0359 17 3243895 3246561 Gso15g1527 15 18596643 18600572 PCT
Gso17g0359 17 3243895 3246561 Gso9g0651 9 8420673 8424661 PCT
Gso15g1527 15 18596643 18600572 Gso17g0359 17 3243895 3246561 PCT
Gso9g0651 9 8420673 8424661 Gso17g0359 17 3243895 3246561 PCT