Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0356 ATGATGGCGACGAGTAACAACGCGTCATGCCCAGCACCCATGAAGGCAACGTCGAATGGGGCGTTCCAACATGAGAACCCGCTCGATTATGCGCTTCCTCTGTTAATCCTCCAGATTTGTTTGGTCGTCTTTTTTACTAGATTTATTGCATTCCTCTGCAGACCCCTCAGACAACCCCGAGTCATTGCTGAGATCATTGGAGGAATACTACTTGGGCCATCTGCAATTGGACGAAATGAGAAGTTTCTGAACACGGTTTTCCCAAAGAAAAGCATAACGGTTCTTGACACACTAGGCAACATTGGTCTTTTGTTTTTCTTGTTTCTAGTTGGTCTTGAGCTTGACATGCGTGCGATTCGTCGTACTGGTCACAAGGCCTTAGGCATTGCCCTTTGTGGAATCACTGTGCCTTTTGTTCTTGGCATTGGCACTTCTTTTGCTCTTAGAGCCACCGTGTCCAAAGGTGCTGAGCCAGTTTCCTTTCTTGTCTTCATGGGTGTTGCACTCTCAATCACTGCCTTCCCTGTCCTTGCAAGGATCCTAGCTGAGCTCAAACTCCTCACCACTGATGTTGGTCGCATAGCAATGTCTGCTGCAGCTGTCAATGATGTTGCAGCCTGGATTCTTCTTGCACTTGCCATAGCCATTTCTGGTTCTAATGGATCCCCCTTAGTTCCTCTCTGGGTCTTGCTCTCTGGTGTTGCTTTTGTTCTCTTTGCTGTATTTGCCATTAGGCCATTGCTTGTAGCTATGGCTAACCGTTCCCCCGAGGGTGAGCCAGTGAAGGAGGTTTACATATGCATCACATTGACACTGGTTTTGGCTTGTAGCTTTGTCACTGATACTATTGGAATCCATGCCCTCTTTGGGGCTTTTGTGCTTGGTACCATTATGCCCAAAGATGGTTCCTTTTCTGGGGTGTTGATTGAGAAGATAGAAGACTTGGTGTCTGGCCTTTTCCTGCCACTGTTTTTTGTGTCTAGTGGCTTGAAGACTAATGTGGCAAGTATTAGTGGAGGACTTTCTTGGGCAATGTTGGTGCTTGTTATATTCAATGCTTGCTTTGGGAAGATTGTTGGCACAATCGTTGTGTCGTTAATCTGCAAGGTGCCTTCTCATGAAGCCGTGGCACTTGGATTTCTTATGAACACAAAGGGCTTGGTAGAACTCATCGTTCTCAACATAGGGAAGGACCGTAAGGTGTTGAATGACCAAGCATTTGCCATTTGTGTTCTCATGGCATTGTTTACCACCTTCATCACCACCCCAATAGTAATGGCTGTTTATAAACCAGCTCGCAGAGGAGCACCTTACAAACACAAAACAATTCAGCGCAGAGATCCTGACACTGAGCTTCGAATGCTAATTTGCTTCCACACCTCCCGCAACATCCCCACGTTAATCAATCTCATAGAGTCTTCCCGCGGAATTCGAAAGAGAGGAAAGCTTTGCATATATGCAATGCACCTGGTGGAACTCTCAGAGCGATCTTCAGCAATCACAATGGTTCACAAGGCACGTAGGAATGGCATGCCCTTTTGGAACAAGAAACAGGATGACAAAGATCAAATGATCATTGCTTTTCAGGCTTATGAGAAACTAAGCAGTGTCAATGTGCGCCCCATGACAGCCATCTCTGCTCTCAATAGCATCCATGAGGATATTTGTACTAGTGCCCACCGAAAATGTGCAGCCATGATTATCCTTCCATTCCACAAACATCAACGTGTGGATGGATCAATGGAGTCACTAGGACATTCATTCCATGTGATGAATCAGCTTGTGCTAAGCCATGCTCCTTGCTCAGTGGGTATTTTGGTTGATCGAGGTTTTGGAGGGACAAGCCAAGTCCCAGCTAGTGATGTGTCTTATAAGGTTGTTGTGCCCTTCTTTGGAGGACGTGATGATCGTGAAGCACTTTGTTATGGTATGAGAATGGCTGAGCACCCGGGGATTTTGCTCAATGTGGTTAAGTTTATGCCTCCACCTGGGACATCATTGGCCTTTGGTGCTAAATTGGTTGGGGTGTCATCAAACAAGGACAAGAAAGCATTCGAAGTGGTTGGTGGCAATTATTATGATGATAAACAACAAGATGATCAATTGTGGAGTGAGTTTTTAAGTGCATGCAACAACAACAACCAAGAGTCAATGAAGCATGAGCAAAAACTGGTGGCAAGCAAAGGTGATATTGAAGCAGCATTAAAGGAAATGAATAGGAGCAATCTAATATTGGTTGGTAGAATGCCATCAGTAGCACCTTTGATTAGCAGAAGTGATTGTCCAGAACTTGGACCTGTTGGAAGCTACATGGCTTCTTCAGATTTCTCCAATGTTACATCAGTTATGGTAATTCAGCAATATAATCCTTCAACTGACATTCATCCACTAGTTATGGAGGAATCTGATTACCCAGATATGCCAGACACACCAACGAGTTAA 2442 0.45 MMATSNNASCPAPMKATSNGAFQHENPLDYALPLLILQICLVVFFTRFIAFLCRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNTVFPKKSITVLDTLGNIGLLFFLFLVGLELDMRAIRRTGHKALGIALCGITVPFVLGIGTSFALRATVSKGAEPVSFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIAISGSNGSPLVPLWVLLSGVAFVLFAVFAIRPLLVAMANRSPEGEPVKEVYICITLTLVLACSFVTDTIGIHALFGAFVLGTIMPKDGSFSGVLIEKIEDLVSGLFLPLFFVSSGLKTNVASISGGLSWAMLVLVIFNACFGKIVGTIVVSLICKVPSHEAVALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRRDPDTELRMLICFHTSRNIPTLINLIESSRGIRKRGKLCIYAMHLVELSERSSAITMVHKARRNGMPFWNKKQDDKDQMIIAFQAYEKLSSVNVRPMTAISALNSIHEDICTSAHRKCAAMIILPFHKHQRVDGSMESLGHSFHVMNQLVLSHAPCSVGILVDRGFGGTSQVPASDVSYKVVVPFFGGRDDREALCYGMRMAEHPGILLNVVKFMPPPGTSLAFGAKLVGVSSNKDKKAFEVVGGNYYDDKQQDDQLWSEFLSACNNNNQESMKHEQKLVASKGDIEAALKEMNRSNLILVGRMPSVAPLISRSDCPELGPVGSYMASSDFSNVTSVMVIQQYNPSTDIHPLVMEESDYPDMPDTPTS* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0356 813 Pfam Sodium/hydrogen exchanger family 40 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso17g0356 813 Gene3D - 34 436 IPR038770 -
Gso17g0356 813 PANTHER CATION/H+ EXCHANGER 3 7 811 - -
Gso17g0356 813 PANTHER CATION/H + ANTIPORTER 7 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0356 Gso-Chr17 3227234 3231601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0356 1 804 Antiporter Super Family AT3G17630 67.164 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0356 - - gmx:100780382 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0356 17 3227234 3231601 Gso17g0356 17 3227234 3231601 ECH
Gso13g0860 13 22909661 22913545 Gso17g0356 17 3227234 3231601 GST