Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0352 ATGTGCCAAAGAAGCATGAGTGGTGGTGGCATGAAGCTGCTGAGGATGTTTGTGTTTGTGGGGTTGGTGATTGTGAAATGGGTGGAAGGCTTTGAGGATGCTAATGTGACAGACCTAGGCATGCAATATGTCAGTGGAAGAGGTTTCTACAGACCTTTGATGGTTGGTTTTACTCATATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCGGGGTACCACTTCCACCGTGGATATGGTTCAGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAACTGTAAAAAATTGTCTTTATAGTAAGAAAACACGTCATGGTTCATCATTTTTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAGTTGGAATAGAATAAAAATCCGTTATTGTGACGGTGCATCATTTAGTGGGGACAGTCAAAATGCGGGAGCAGGGTTGTATTTCAGAGGGCAGCGCATTTGGCAAGCTGCTATGGAAGATTTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGTTGTTCTGCGGGAGGTTTAGCTACTATTATACATTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTAAAATGCTTAAGTGATGCTGGATTATTCCTTGATTCTGTTGATGTTTCTGGTCGTCGCAGCTTAAGGAATTTGTTCGGAGGTGTGGTTACCTTGCAGGGAGTGCAAAGAAGTCTTCCAAGGAGTTGTACTAGTCGCCTCAATCCAATTTTGTGCTATTTTCCTCAGCACTTAATTGCTGGTGTCAGGACACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCGAGTCTTGCTCCACCATCTGCTGACTACCACTGGAACTGGTATGAATGCAGAAAAAATTATGCACGTTGCAGTGCACCACAGATACAGTATCTTCAAGGTTTCCGAAATCAGATGCTTAGATCTACAAGAGCCTTCTCACGGTCTTTTAAAAACGGGTTGTTCATAAATTCTTGTTTCGCCCATTGCCAATCAGAAAGACAGGATACATGGTTTGCTCGTGATTCCCCTCATATTGGAAATAGAGGGATTGCGGAGTCTGTTGGGAACTGGTATTTTGATCGAGTTAGTGTCCAGGCCATTGGCTGCCCTTACCCTTGTGACAAAACATGCCATAATTTGGTATTTAAGAGATAG 1260 0.4294 MCQRSMSGGGMKLLRMFVFVGLVIVKWVEGFEDANVTDLGMQYVSGRGFYRPLMVGFTHINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTVKNCLYSKKTRHGSSFFMEKQIPFIGILSNKAEENPDFFSWNRIKIRYCDGASFSGDSQNAGAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSVDVSGRRSLRNLFGGVVTLQGVQRSLPRSCTSRLNPILCYFPQHLIAGVRTPLFLLNAAYDTWQIQASLAPPSADYHWNWYECRKNYARCSAPQIQYLQGFRNQMLRSTRAFSRSFKNGLFINSCFAHCQSERQDTWFARDSPHIGNRGIAESVGNWYFDRVSVQAIGCPYPCDKTCHNLVFKR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0352 419 Pfam Pectinacetylesterase 53 397 IPR004963 GO:0016787
Gso17g0352 419 PANTHER PECTIN ACETYLESTERASE 17 417 - -
Gso17g0352 419 PANTHER NOTUM-RELATED 17 417 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0352 Gso-Chr17 3197063 3202857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0352 54 419 Carbohydrate Esterase AT1G57590 68.579 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0352 K19882 - gmx:100791571 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0352 17 3197063 3202857 Gso17g0352 17 3197063 3202857 ECH
Gso17g0352 17 3197063 3202857 Gso19g1893 19 47650100 47653969 ECH
Gso13g0866 13 22953169 22961345 Gso17g0352 17 3197063 3202857 GST