Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0351 ATGTCGCCCACCCTCATGGCAAATCAAAACCAAAGAGAGTGTGCTGAATGTCTGACTTGGCTTTGCTTTTTGCTTATCACTCTCTCTCTCTCTTTCTTTCTTTTTTGTTTTAAAGTAGCTTCTGTTGTGTGCATATATAAGGAGCCTAAGGTGGCGGCTTTTCTTTTCAGTCTTGATCAGTTTCATTCATTGGAAGATATGGGAACATTAGAACAAATTGATGCTCCTCAAACCCAGTCATCATCATCTTCTTCTTCTTCCATCGATAGCAACAACAACCCTTCTAGGACTAGGACTCCACCATCCTCTTCCCCTTCATCAAGTCTATGCAGAAACAGAACTGATTTGAGCACTGACCTCAGACTTGGTCTTAGCATCTCTCCTTCTTCTCAATCTGAATCACCCTTCAATTCAACACGAAGGGAAGAAAGTTTTGACTGGCCACCAATTAAGTCTATATTGAGAAGCACCCTTGTGGGGAAACAAAGCTATCTGAGCCAAAGACCCTCTTTGTTTGTCAAAGTCTATATGGAAGGAATCCCCATCGGAAGAAAATTGAATCTGATGGCACATTATGGCTATGATGGACTAGTGAAAACTCTTGGCCATATGTTTAGGACGAACATTCTCTGTCCTAACTCTCAACCACTTAATTCTGGGAATTTTCACGTGCTAACTTATGAGGATCAAGAAGGGGACTGGATGATGGTTGGAGATGTGCCGTGGGAGATGTTCTTGAACAGTGTGAAGAGGCTGAAGATCACAAGAGCTGACCGATGCTAG 783 0.4253 MSPTLMANQNQRECAECLTWLCFLLITLSLSFFLFCFKVASVVCIYKEPKVAAFLFSLDQFHSLEDMGTLEQIDAPQTQSSSSSSSSIDSNNNPSRTRTPPSSSPSSSLCRNRTDLSTDLRLGLSISPSSQSESPFNSTRREESFDWPPIKSILRSTLVGKQSYLSQRPSLFVKVYMEGIPIGRKLNLMAHYGYDGLVKTLGHMFRTNILCPNSQPLNSGNFHVLTYEDQEGDWMMVGDVPWEMFLNSVKRLKITRADRC* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0351 260 PANTHER AUXIN-RESPONSIVE PROTEIN IAA31 82 260 - -
Gso17g0351 260 ProSiteProfiles PB1 domain profile. 170 259 IPR000270 GO:0005515
Gso17g0351 260 SUPERFAMILY CAD & PB1 domains 166 254 - -
Gso17g0351 260 MobiDBLite consensus disorder prediction 74 112 - -
Gso17g0351 260 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 82 260 IPR003311 GO:0005634|GO:0006355
Gso17g0351 260 Gene3D - 165 260 - -
Gso17g0351 260 Pfam AUX/IAA family 135 256 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0351 Gso-Chr17 3184973 3186614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0351 174 254 B3 DNA Binding Superfamily AT4G23980 39.506 2.35e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso17g0351 AUX_IAA 7e-31 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0351 K14484 - gmx:100527448 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0351 17 3184973 3186614 Gso17g0351 17 3184973 3186614 ECH
Gso13g0867 13 22970660 22972246 Gso17g0351 17 3184973 3186614 GST