Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0298 ATGGCTTTCCTGAAGCAGTTAGTGGATCTTGTCCAGGCCATTTTACTACTATCCCTAAATATAATAGCCATGCAATTAGTACTATTGTGTCTACTGATACTGAAGCTCACTCCAGCCTTTGCAACCACCCCGAATGATGCCTATGGTGGTGATAGTAGTGGCTGTCCATTAGGGACTGACATATACCAATACACTTGCCCTGAAGCTGAGGCCATCATATTCTCTTGGGTGGAGCAGGCAGTGTCTCAAGACTCAAGAATGGCAGCCTCACTTCTTAGGCTACATTTCCATGATTGCTTTGTTAATGGTTGTGATGCTTCAGTCTTGCTAGATGACACACAGGACTTTGTTGGTGAGAAAACTGCGGGTCCAAATTTGAATTCCCTGAGAGGATTCGAAGTAATCGACCAAATCAAATCCGAACTGGAACTAGTCTGTCCACAGACTGTCTCTTGTGCTGACATACTCGCAACTGCTGCCAGAGATTCAGTTCTTCTGTCAGGAGGTCCAATTTGGGAGGTGCAAATGGGAAGGAAAGATGGCATTACTGCTAGCAAGAATGCAGCAAATAATAACATCCCAGGTCCAAACTCCACTGTTGATGTGCTCGTAGCTAAGTTCGAGAATGTAGGCCTTACACTTAAAGATATGGTTGCCCTTTCAGGTGCGCACACTATAGGGAAAGCTCGGTGCAGAACATTTAGGTCGCGCTTACAGACTAGTAGTAACATTGATTTCGTCGCATCATTGCAACAGTTGTGCTCAGGACCCGACACAGTTGCACATCTTGACCTGGCTACACCTGCTACGTTTGATAATCAATATTTTGTAAATCTTCTATCTGGGGAGGGATTGCTCCCATCAGACCAGGCTCTTGTGAATGGCAATGATCAGACACGACAGATTGTCGAAAACTACGTGGAGAACCCATTAGCTTTCTTTGAGGACTTCAAACTTTCTATGTTGAAAATGGGAAGCTTGGCATCACCAACTCAAACTAACGCCCAGATTCGTAGGAACTGCCGAACTATTAACTAA 1038 0.448 MAFLKQLVDLVQAILLLSLNIIAMQLVLLCLLILKLTPAFATTPNDAYGGDSSGCPLGTDIYQYTCPEAEAIIFSWVEQAVSQDSRMAASLLRLHFHDCFVNGCDASVLLDDTQDFVGEKTAGPNLNSLRGFEVIDQIKSELELVCPQTVSCADILATAARDSVLLSGGPIWEVQMGRKDGITASKNAANNNIPGPNSTVDVLVAKFENVGLTLKDMVALSGAHTIGKARCRTFRSRLQTSSNIDFVASLQQLCSGPDTVAHLDLATPATFDNQYFVNLLSGEGLLPSDQALVNGNDQTRQIVENYVENPLAFFEDFKLSMLKMGSLASPTQTNAQIRRNCRTIN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0298 345 ProSiteProfiles Plant heme peroxidase family profile. 56 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 Gene3D Peroxidase, domain 2 194 324 - -
Gso17g0298 345 CDD secretory_peroxidase 57 342 IPR033905 GO:0004601|GO:0042744
Gso17g0298 345 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Haem peroxidase superfamily signature 150 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Haem peroxidase superfamily signature 168 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Haem peroxidase superfamily signature 216 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 130 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 149 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 168 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 215 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 PANTHER PEROXIDASE 72-RELATED 34 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 Pfam Peroxidase 77 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 SUPERFAMILY Heme-dependent peroxidases 57 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g0298 345 Gene3D - 62 345 - -
Gso17g0298 345 PANTHER PEROXIDASE 40 34 344 - -
Gso17g0298 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 216 226 IPR019793 -
Gso17g0298 345 ProSitePatterns Peroxidases active site signature. 88 99 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0298 Gso-Chr17 2665166 2667430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0298 31 345 Peroxidase AT4G16270 60.180 2.33e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0298 K00430 - gmx:100814091 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2005 7 44089490 44094369 Gso17g0298 17 2665166 2667430 GST