Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0290 ATGGCATCGTCACCTTCATCATCATCGTCGTCGTCGTCGTCTATGGTCTCAAATCCAGTTCCGAACACGGACCGGTCACGTGACGCGAAACGGAGGAAGAAGAAAGCGCAGCTGAGGCAGCAACTACGGCAAGAGGACCAGAGCAATCCCAAGTGGAAATCCCAAGCGCAGCAACAAATCTACTCCTCCAAGCTGCGCCAAGCCTTAGCCAGAGTTAACCTCGGGTCGTCGGCGCCGCCGCGCCGAGGCAAAGCCGTGCGCGACGCCGCCGACAGAGTCCTAGCCGTGACGGCCAAGGGGAGGACGCGCTGGAGCCGAGCCATCCTCACCAACCGGCTCAAGCTCAAGTTCACAAAACACAAGCGACAGAGAGTTACAATTACAACACCCCCAACCCGGTCAAAGAAACCCCGGGTCAGCGTTTACCGGCTGAAGGGGAAGGGTTCGCCGGGTGTGCAGAGAAAAGTGAGGTTTCTCGGACGCTTGGTTCCCGGTTGCCGAAAAGAACCGTTACCGGTTATTTTGGAAGAAGCCATTGATTACATACCCGCGCTTGAGATGCAGGTTCGAGCCATGAGCGCTCTCTTTAACCTTCTCTCCGGCGGCGGCGCCGCCTCCACTTCCGCGCCACCTAGCTCGTCATAG 645 0.5814 MASSPSSSSSSSSSMVSNPVPNTDRSRDAKRRKKKAQLRQQLRQEDQSNPKWKSQAQQQIYSSKLRQALARVNLGSSAPPRRGKAVRDAADRVLAVTAKGRTRWSRAILTNRLKLKFTKHKRQRVTITTPPTRSKKPRVSVYRLKGKGSPGVQRKVRFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGGGAASTSAPPSSS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0290 214 MobiDBLite consensus disorder prediction 1 56 - -
Gso17g0290 214 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 212 IPR044660 GO:0006355
Gso17g0290 214 CDD bHLH_AtIBH1_like 143 195 IPR044549 GO:0006355
Gso17g0290 214 MobiDBLite consensus disorder prediction 42 56 - -
Gso17g0290 214 MobiDBLite consensus disorder prediction 1 23 - -
Gso17g0290 214 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 15 212 - -
Gso17g0290 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 203 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0290 Gso-Chr17 2568866 2569871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0290 47 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 54.696 2.23e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0290 - - gmx:100803765 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0290 17 2568866 2569871 Gso17g0290 17 2568866 2569871 ECH
Gso7g2012 7 44169422 44170540 Gso17g0290 17 2568866 2569871 GST
Gso17g0290 17 2568866 2569871 Gso15g1164 15 11408849 11410016 PCT
Gso17g0290 17 2568866 2569871 Gso9g0296 9 2843820 2845607 PCT
Gso15g1164 15 11408849 11410016 Gso17g0290 17 2568866 2569871 PCT
Gso9g0296 9 2843820 2845607 Gso17g0290 17 2568866 2569871 PCT