Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0260 ATGGCAAAGTCGAAGAACCACACCGCTCACAACCAGTCCTACAAGGCCCATAAGAATGGCATCAAAAAGCCAAAGAGGCATCGCCACACTTCCACCAAAGGGATGGATCCAAAGTTTCTGAGGAACCAGAGGTACGCGAGGAAGCATAACAAGAAGAGCGGTGAAACAGCCACCGAAGAAGAGTAA 186 0.4946 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETATEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0260 61 MobiDBLite consensus disorder prediction 1 32 - -
Gso17g0260 61 Gene3D - 1 61 - -
Gso17g0260 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Gso17g0260 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Gso17g0260 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Gso17g0260 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0260 Gso-Chr17 2360339 2361027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0260 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 5.93e-34 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0260 K02905 - gmx:100803210 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2040 7 44380183 44380962 Gso17g0260 17 2360339 2361027 GST
Gso17g0260 17 2360339 2361027 Gso15g1191 15 11825556 11826313 PCT
Gso17g0260 17 2360339 2361027 Gso9g0325 9 3132014 3132753 PCT
Gso15g1191 15 11825556 11826313 Gso17g0260 17 2360339 2361027 PCT
Gso9g0325 9 3132014 3132753 Gso17g0260 17 2360339 2361027 PCT