Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0247 ATGCTCCTCCGAAGCCACTGTTGCTACCTCGGCATAATCGCCGGGCTAGCAGTGTTCCTCGCAACGACGTCGTTCGCCGACGCGCAATCCTGCAACGGCATCCTCGTCTCATACGCCTACACCGGCGGCCTGCGGTTGCCGCCCAACGTCTCCGACTCGGCTAAGCAGCCGTACCGGTTCGAGTCGACGGTGACGGTTCTCAACAACGGCCTCGACGAGCTCAAGTCGTGGAAGGTCTTCGTTGGGTTCGACCACGACGAGTTGTTGGTCTCCGCCTCCAATGCTGTGCTCGCCGACGGCACCACCCTCCCCGCCGCCGTCGGAAACGGCACCGTCTTCGCCGGTTTCCCCATGACTGATCTCAAGACCGCCGTCGAAACCGCCGGCGACTTGACCCAGATGCAGGCTCAGATCGAACTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAACCTCGCCAATGATGGTTTCCTCTGTCGCAAATCCACCGCTCAAGGGAAGAATGCGAGTAGTGTGTGTTGCACGAGAGATCCCAAGTTCAAAACTAACATTACTACGGATGAAGAGTTTCTGCCACGTCAGAGTGGTGATCTTACCATTATGTATGATGTGATCAGAACTTATGATTCAAATTACTGGGCTGAGGTTACCGTTGCAAACCATAACCCACTTGGGAGGCTTGATAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCGGTTGTGGATGCTTCTGATTGTCTCTTTGGTAAGCAAGGAACTTTCTATAGGGATCTTGACTTTGCCCTTGTGTTGAATTGTGAGAGAAGGCCAACCATAATTGATCTCCCTCCCACCAAGTTCAATGATTCCGACCTTGGGAAGATTCCCTTTTGTTGCCGGAATGGTACTATTTTGCCTCCGTCCATGGATCCTAGCATGTCTGCTTCGAGATTCCAAATGCAGGTCTTCAAGATGCCGCCGGCGCTTAACCGATCCCAGCTTTCGCCACCGCAGAACTGGAAGATAAGTGGCACACTCAACCCTGACTATGAATGTGGCCCTCCAGTAAGAGTGAGTCCTACCGAAAATCCTGACCCGTCCGGCTTACCTTCAAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATAACAACAGCCAAGAGAACATCAAGTAAATGCTGTGTCTCGTTTTCATCTTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCTTGTGGATGCCCCAAGAACACAGAGAGAACATGTAGTACTAGTGCTCCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCCTTTGTGAACCGAACTGCCAAGGCTGTTGCTTGGGCAAGTCTGAAACATCTCCGGGTGCCAAACCCATTGCCGTGTAGCGATAACTGTGGTGTGAGCATCAATTGGCATTTGTACACAGACTACACTAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGACACTAATTTTGCAGACTGGTTTGCCGCAGTACAAATGGACAAAGCAGCTTCGGGTTTTGAGAAAATGTATTCATTCAATGCAACTCTTCTAGATGGTGTAAACAATACAATAATCATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCAGATGGAGCTGACCCTTTGAGAGATCCTAGGGTGCCTGGTAAACAACAATCAGTTATCTCATTTACAAAGAAAACTACTCCTGGAATCAACGTAGCTCGTGGAGATGGGTTTCCCACTAAGGTATTTTTCAATGGCGAAGAATGTTCTCTTCCTTCAGTGTATCCAAGCAGTAGTGGTTTCAGGAATGGTTTTTCATTGGCTACTTCCTTGCTTCTAACACTGTTGATGATCCTCTTGATGCGGTAA 1935 0.4956 MLLRSHCCYLGIIAGLAVFLATTSFADAQSCNGILVSYAYTGGLRLPPNVSDSAKQPYRFESTVTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVFAGFPMTDLKTAVETAGDLTQMQAQIELVGTVFGVAPPSVPMPKSINLANDGFLCRKSTAQGKNASSVCCTRDPKFKTNITTDEEFLPRQSGDLTIMYDVIRTYDSNYWAEVTVANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASDCLFGKQGTFYRDLDFALVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPDYECGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKRTSSKCCVSFSSYYNDSVIPCKTCACGCPKNTERTCSTSAPAMWLPPEALLVPFVNRTAKAVAWASLKHLRVPNPLPCSDNCGVSINWHLYTDYTKGWSARVTLFNWGDTNFADWFAAVQMDKAASGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKTTPGINVARGDGFPTKVFFNGEECSLPSVYPSSSGFRNGFSLATSLLLTLLMILLMR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0247 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0031225
Gso17g0247 644 PANTHER COBRA-LIKE PROTEIN 7 3 643 - -
Gso17g0247 644 PANTHER COBRA-LIKE PROTEIN 7 3 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0247 Gso-Chr17 2247787 2250278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0247 31 629 COBRA Gene Family AT4G16120 68.657 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0247 - - gmx:100803929 1306.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0247 17 2247787 2250278 Gso17g0247 17 2247787 2250278 ECH
Gso7g2054 7 44497036 44499942 Gso17g0247 17 2247787 2250278 GST
Gso17g0247 17 2247787 2250278 Gso9g0337 9 3277175 3279992 PCT
Gso9g0337 9 3277175 3279992 Gso17g0247 17 2247787 2250278 PCT