Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0215 ATGGGTGGCCAGATGCAGCAGAGCAATGCCTCCGCCACTGCTCTGTATGACCACGCCGGCCCCGGATCCCTGCACAATGCGGCAGGACCGGCCACCGATGCCGGCGACGCCGTCATGGCGCGATGGTTACAATCCGCCGGCTTGCAGCACCTGGCCTCTCCATTGGCTTCCACTGCCATCGATCAACGCCTCCTTCCCAACCTTCTTATGCAGGGTTATGGAGCACAGTCTGCAGAGGAAAAGCAGAGGCTTTCTAAGTTAATGAGAAACCTCAATTTTAATGGGGAATCTGGTTCTGAGCCATATACGCCCACTTCCCAAAATTTAGGTGTTGTATCAGATGGGTTTTATTCTCCAGACTTCAGGGGAGATTTTGGGGCTGGGCTTTTGGATCTTCATGCCATGGATGATACAGAGCTTTTGTCTGAGCATGTTATTTCAGAACCATTTGAACCATCACCCTTTATGCCTGGAGGCACTAGAGGTTTTGTAGATGACTTCAATTCAATTAGCAGAAAGCAGGAGAGAGGAGAAGCAGATTCTGATGCATCACTTTTCTTACCTACAAATGAAAAAGAGAATAATACAAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCATTAAATAAGAAGGAACTTGCTAAGAAGGAGGATGATATTGTAACTGTATATGACAATGCATATTTGACAGTCCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTCTTGACGAGAATGTTACCAATGATGAAGTATATCGAGTTACCGTAGAACCAATTATTCCCACAATTTTTGAGAAAACCAAAGCTACTTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCGTTGCCGCTCAGAGCTGCAGAAGACCTTGTTAGACAATTGCATCGACCAGTATATCGAAATCAGAGATTTAAATTGTGGCTTAGTTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGTGATAGAAAGAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTGTGTATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTCATTGAAAAGGGGAATGCAGCAAGAAGTACAGGGTCAACCGGTGCAAATGAGGAGTCCTCCAGATCACATGCTATCTTACAACTGGTTGTAAAGAGGCACAATGAGGTAAAAGAGAGCAGGCGGAACAATAATGATGTAAATGAGGCAAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGATCGTCAGACAAGGATTGAAGGTGCTGAAATCAACAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGCAAGCTTACAGAAGTGCTCCGGGACTCCTTTGTTGGAAATTCAAAAACTGTTATGATCTCTTGTATATCCCCAAATGCTGGGTCATGTGAACACACACTTAATACCTTGAGATATGCAGACCGAGTTAAAAGTCTATCCAAGAGTGGAAATCCTAGAAAGGACCAGGCCCCAAATCCTATACCACCACCAGCAATTAAAGAGGTTTCATCCACATCTTCACTTCCAGGTAGTGTTGGTGCAGAGGATTTTAATAATGGTCAACGTCAAGAGGTAAAAACAATGGACATGAGCAGGAAAGTTGTCGAAAAGGAAAGTTCTTTGTACAGCTCCGCTGCTGATGTTGACAAACAATCAAGTTTTTCTTCTAGTTGTCAATTCAATGGGCGAGAGGAAAAAAGCTCAGCTTCTGCCCCAATGGACAGGGAAAAGTTTGAAGTAAAGAATTCTTACGGTGGTGATTCTACCAGTCAGAAGATGAACTCTTATTCCCTAAATGTTACAGATGAGAAAGTGCAAAGGGTGTCTCCTCCACGCAGAAAAGGGACTAAGGAGGAGAAATCTGAAAGATCTGTAAATTGGGTAAAACGGGATGTCGATGGTTATGATCATTCCACCACAAGCTCCAAACAGCAGAGCACAGGAAATTATAACATTACCACTGGATCGGGGCAGTCTGAAACAGAATCCTCTTCTAATGTGAATATCAGCGCAATACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAGGAAATTGAAGACACAATGGAGATTGTTCGTGAAGAAATGAAACTACTGGCAGAAGTGGACCAGCCGGGAAGTCTTATTGACAACTACGTGACCCAGTTGAGTTTCGTGCTTTCTCGCAAAGCAGCTAGTCTCGTCAGTCTCCAAGCACGCCTTGCAAGATTCCAACATCGACTAAAAGAACAAGAGATACTAAGTAGAAAAAGAGTGCCCCGTTAA 2448 0.4301 MGGQMQQSNASATALYDHAGPGSLHNAAGPATDAGDAVMARWLQSAGLQHLASPLASTAIDQRLLPNLLMQGYGAQSAEEKQRLSKLMRNLNFNGESGSEPYTPTSQNLGVVSDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGTRGFVDDFNSISRKQERGEADSDASLFLPTNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVYDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFEKTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHRPVYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEVKESRRNNNDVNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPIPPPAIKEVSSTSSLPGSVGAEDFNNGQRQEVKTMDMSRKVVEKESSLYSSAADVDKQSSFSSSCQFNGREEKSSASAPMDREKFEVKNSYGGDSTSQKMNSYSLNVTDEKVQRVSPPRRKGTKEEKSERSVNWVKRDVDGYDHSTTSSKQQSTGNYNITTGSGQSETESSSNVNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0215 815 SMART kinesin_4 201 544 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g0215 815 Pfam Kinesin motor domain 209 537 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g0215 815 CDD KISc_KIF2_like 203 536 - -
Gso17g0215 815 PANTHER KINESIN-LIKE PROTEIN 5 679 - -
Gso17g0215 815 PANTHER KINESIN-LIKE PROTEIN 676 814 - -
Gso17g0215 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 538 IPR027417 -
Gso17g0215 815 Gene3D Kinesin motor domain 184 541 IPR036961 -
Gso17g0215 815 Coils Coil 788 808 - -
Gso17g0215 815 MobiDBLite consensus disorder prediction 538 722 - -
Gso17g0215 815 PANTHER KINESIN-RELATED PROTEIN 6 5 679 - -
Gso17g0215 815 PANTHER KINESIN-RELATED PROTEIN 6 676 814 - -
Gso17g0215 815 ProSitePatterns Kinesin motor domain signature. 437 448 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso17g0215 815 MobiDBLite consensus disorder prediction 665 696 - -
Gso17g0215 815 MobiDBLite consensus disorder prediction 603 625 - -
Gso17g0215 815 MobiDBLite consensus disorder prediction 697 722 - -
Gso17g0215 815 MobiDBLite consensus disorder prediction 558 584 - -
Gso17g0215 815 PRINTS Kinesin heavy chain signature 284 305 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g0215 815 PRINTS Kinesin heavy chain signature 394 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g0215 815 PRINTS Kinesin heavy chain signature 438 456 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g0215 815 PRINTS Kinesin heavy chain signature 488 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g0215 815 Coils Coil 732 763 - -
Gso17g0215 815 ProSiteProfiles Kinesin motor domain profile. 203 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g0215 815 MobiDBLite consensus disorder prediction 627 641 - -
Gso17g0215 815 MobiDBLite consensus disorder prediction 642 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0215 Gso-Chr17 1998147 2006216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0215 195 538 Calmodulin-binding Proteins AT5G65930 33.989 5.38e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0215 K10393 - gmx:100798612 1585.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0215 17 1998147 2006216 Gso17g0215 17 1998147 2006216 ECH