Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0213 ATGAGTATGGAGGAACCTCAGTTCCGCGAACATCCCAAAGCCAAAATCGCCACCATTCCGCCGTCGCAGCACTCCGACGGCGCCGCCGCCGAATTGCGCGGTGCCGATTGCAACCTGGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCGGGTTCCTTCTCTGATATCGTCGTCAATGCCATGGGTTCCACTTATCACCTCCACCGTCTTATCCTCTCTCGCAGTTCGTATTTCAGGAACATGCTTCATGGGCCTTGGAAAGAAGCCGGTGCTCCTGTTGTGGCTCTTCATGTTGATGATAAGAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCATATCTATACGGACACCACCCTAAGCTTAATGATAATAATGCTTTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGATTTATGTGGAATTTGTACGGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGACTATGGCATGCATGGGGAGCGTGTTAGAACTGCTTGCTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTACATGCATTACTGACTTCTAATGATCTGTGGATACTCAATGAAGAGAAACGGTTCGAATTGGCTTTGTACACATTCCTGGCAAAAAGTGCTCATTGCAAGGTTGAACATCCTGCGCATGGAATTTCTGGCACTGAGTCTGCAACCGGTATCCACACTGATTCTGGTAGCTCCAAGGGAAAAATTGTAACTGATAGCTGTACTAGTAACAGGTTGGAAACTGACATGGGGAAAATTGGTCTTAAAACTGATCTAAAGGACCCTAGCACTCCTAGTCTTCTAGTTGAGGTTGCAGATCCAGTGGCAGACTTCAAAGATGGGGGGGTTTCTGTTTCCAATGAACAGGTTCCACAAGCTTCATATGTCAGTTCACCAAACCTGAATCCAAGATATTCTTGTGACATGGAAGGGCCGTCATTGGGTAATTCATTGCCTGATACAGATGAGGTGAGAACATCGTGTTATGTTGAGACACCTCTTGGTGCTGGAGCTACTAGTATGGGAGCCACTGGAGTGGGTATTGAAGGGACATCTGAAGAAGGACCTTTCTACCATTTAGACAACAATAGTTGGTTAGTTAGAGATCAATCAAGATATTGCTTTTCATCGAATTCTTGTAATGAGCTGACATCCAATGATTGGGGAAGATATGGAACTCCTTTATTTTCATGGAATGGCCAGGTTGTTGGCAGAAGACAGCTTAAATCTCACCCCAGAGGAAACTTCAGAGGTCATGGAGATGAATATGACGCATTTTTCAATATATTTGAAGGGGGGTCCCTTTTATATTGCAATATGTCTTTTGATGCACTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGACGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCTGATACATGCAAAGTTTGCTCCCTCATGAACATGGCCTGCACTTGTCAGAAGCAATTTGCATTTTCACATGGAGCTTCTACCTCCGGATCTTACGTGCAAGAACACAATCAGAACATTATGCCTGGCAATGTGGGAAATATATATGTTGCTGAATCTTCTGCAGGCGAAAGAAATGGCCTTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCAGCATCTGCTTCACCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGAGTTGGCAACAGAAACTATCCTCAGTCTGCGGCCAATGATGATTCAGAGGCACGTGCTGACCCAAATGGAGACCTGGCTGGAGATGGGTTGACAGCTTTAGTTGGGCTAAGCCTGGGAGGGAGTAATGGAACTAATGTACATACAGAGCTAACACAAAGGGGGTATGAAATGGGCTTGCAAAGCAGCATGTCTGGAACTACCGCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCGGAACATACCATTGGTATAGAATGGGATAATGTCAACAGTACTTCCATATCATTGGATTTGAAAGCACCTTTAAGCCATTTTCCCCCTTTTCGCTTTGGTGTACGTTTCGAGGATGTGCATAGGCTTGGTGAGGGCCAGGTTAAGCATTCCCCAGAAGTTTTCTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAAGGGCGGCGAACCCTTGGGTTGTTTCTTCACCGTCGGAAGGCAGAGATAACTGATATACATAGAAAGGTGCATATGTATGTTGACTCGCGTGAAAAGGTGACTGCACGCTACCAGTTGACTGTTCCATCGAAGAGGGAAATGACGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCTAAGGGATGGGGATGGCGAACTGCTCTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTTTAA 2616 0.4537 MSMEEPQFREHPKAKIATIPPSQHSDGAAAELRGADCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEAGAPVVALHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGMHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWILNEEKRFELALYTFLAKSAHCKVEHPAHGISGTESATGIHTDSGSSKGKIVTDSCTSNRLETDMGKIGLKTDLKDPSTPSLLVEVADPVADFKDGGVSVSNEQVPQASYVSSPNLNPRYSCDMEGPSLGNSLPDTDEVRTSCYVETPLGAGATSMGATGVGIEGTSEEGPFYHLDNNSWLVRDQSRYCFSSNSCNELTSNDWGRYGTPLFSWNGQVVGRRQLKSHPRGNFRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMNMACTCQKQFAFSHGASTSGSYVQEHNQNIMPGNVGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSEARADPNGDLAGDGLTALVGLSLGGSNGTNVHTELTQRGYEMGLQSSMSGTTAGGASTGGIPMQMLETPEHTIGIEWDNVNSTSISLDLKAPLSHFPPFRFGVRFEDVHRLGEGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLTVPSKREMTVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0213 871 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 8 871 - -
Gso17g0213 871 SMART BTB_4 57 157 IPR000210 GO:0005515
Gso17g0213 871 Pfam BTB/POZ domain 51 155 IPR000210 GO:0005515
Gso17g0213 871 MobiDBLite consensus disorder prediction 1 27 - -
Gso17g0213 871 ProSiteProfiles BTB domain profile. 57 127 IPR000210 GO:0005515
Gso17g0213 871 SUPERFAMILY POZ domain 51 155 IPR011333 -
Gso17g0213 871 Gene3D Potassium Channel Kv1.1; Chain A 35 190 IPR011333 -
Gso17g0213 871 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 8 871 - -
Gso17g0213 871 MobiDBLite consensus disorder prediction 623 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0213 Gso-Chr17 1976582 1982242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0213 - - gmx:100795961 1769.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0213 17 1976582 1982242 Gso17g0213 17 1976582 1982242 ECH
Gso7g2089 7 44793484 44799471 Gso17g0213 17 1976582 1982242 GST