Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0209 ATGGAGGAATCGTTAGGGCAGAAATGGAAGCAGCGAGAGTTCGCTTTGGCATCAGTTTCCGACCTCTCTTCGGCTCCTTCTTCGGCTTCGCCGGGAATTGCTCGCTTCGACTCTGACGGTCTCCAAATTCATCATCAATCTCACCAGATTCCATTCAATGTCGATCCTCGAACTGTTCAGCTATTCAAGGTGAGTCCTGTTCAATCGGTTTGCGTGGTGGAAGGATCTGATGTTGGTAAAAAGACATTGTATTCCAGGGGAGTCACAATCCAGTTTAGAAATGATGAGGAGAGTGCAGCCTTTCATTGTGTAGTCCAACAGTGGAAGAAGGAAGTCAATGCTCAAGAAGGAAATGTACGAAATGGAACTATTACAACTTCCAAAAGCAAATTTGATGAAAAGATAGAGTCATCATCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGCTGCAGGACTATGTGCGGACAGGGACCTATCATGCTGCTGTTCTTGAGAACCGTGCTGATTTCATTGGTCGTGTTGTAGTTGATGTGGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAAGCTGGTGCAAAGCATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCGCGGAAACTTATAGCTGGAAACCCAACACTGGCTCAACGAATTACAGTGATCAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTCAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCGTTCCTACTGGGAAAATGTTTCCAGGTGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATTGAAATTGCTAATAAGGCCCTGTTTTGGCAGCAGCAAAACTATTATGGTGTTGATTTAACACCCCTACATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCTTCAATGTTCCATGTGATAGACTTCACCAAAATAAAGGAGGAAGAACTGTATGAAATTGATATTCCTCTGAGATTCATAGCCTCTGTGGGCACCAGAGTGCATGGGTTGGCATGTTGGTTTGATGTGCTATTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGGTCACCGACAACCCATTGGTACCAGTTGCGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAATGCACAAAGCTATACAATATACTTAACACTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGAATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCGCAAGCTTATGCATTAGCTCAAGATCAGCAACCTCAACCACTTATACAAACACAGGATATACATATTCAATCTCAGGATTTGGATGAACCAGAAATAGTGCAACAGCCTTTGCCTAATTCATGTGCTCAGATTGATTCACTGATGCGGAATGTTTAA 1608 0.4285 MEESLGQKWKQREFALASVSDLSSAPSSASPGIARFDSDGLQIHHQSHQIPFNVDPRTVQLFKVSPVQSVCVVEGSDVGKKTLYSRGVTIQFRNDEESAAFHCVVQQWKKEVNAQEGNVRNGTITTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVLENRADFIGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPTLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLVPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSMFHVIDFTKIKEEELYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLIQTQDIHIQSQDLDEPEIVQQPLPNSCAQIDSLMRNV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0209 535 CDD AdoMet_MTases 182 282 - -
Gso17g0209 535 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 491 IPR025799 GO:0016274|GO:0018216
Gso17g0209 535 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Gso17g0209 535 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 491 - -
Gso17g0209 535 Gene3D - 285 493 - -
Gso17g0209 535 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Gso17g0209 535 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 252 - -
Gso17g0209 535 Gene3D Vaccinia Virus protein VP39 121 283 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0209 Gso-Chr17 1943787 1952069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0209 143 433 C2H2 Transcription Factor Family AT3G12270 33.981 1.89e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0209 K05931 - gmx:100780736 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2091 7 44804491 44812881 Gso17g0209 17 1943787 1952069 GST
Gso17g0209 17 1943787 1952069 Gso9g0386 9 3762731 3771295 PCT
Gso9g0386 9 3762731 3771295 Gso17g0209 17 1943787 1952069 PCT