Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0205 ATGCGTCCTGCATCCTCTTGTCGTCTCCAGGTAAACATGCTTAATTCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAATAGAGATAGAGGTATTCCTTGTGAAGTTGTCAGTGGCTGCAAAATCCTTCCTGGAGTATGTAGAACAAGCAGTTTCTCCTGCTTGTCAGGTGCAGCCTTAAGTGCAAATGCTACATTAGCAAACACAAACATCTGCAATGGTAAGATAGGAGAAGAAATCCTTCCAAGTTGGGACTCTCCTACTTCATTTCGAAAGGTAACCTCTTCGCCAAGTCTTTCAAAGTTGGACATACTATCATCCTCCCCCCCGAATAGTTTGTCTTACCTTAGCTGCAGTCCTTCTACTGTAAGTGATATCCTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTAAGGAAGTTCAGGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTATTCTGTGCAATATATGACGGCTTTAATGGAAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTATGAAACCATCATATCTTACTTTAATAAGTTAATTTGGGAATTGGAGCCGGGTTCCATCAAAGCTTATGATAAAGGATGCTTGGGTGGATCCCTGCAATATAAGTTGGATGATAGTCTTATTTATCACGAGAATCAATCTCTGTCGAGATTTAAGGGAATAAACAATTCTAATCATGGTTGTTTTGCAAAGTGTAATCCTTCTACTAAGTCAGAAGTATCATGTGATTCATTTTCACATGGGGTACTTGATATCCTTCAACGTGCCATTAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCTGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCACGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCGGTACAGCTGATCGGATGGATAAGAGTGAGAGACTCAAGGCTATACAGCTTACAGATAATCATACTGTTGATAATAAAGTTGAAAGAGCTAGACTTCTGGCTGATCATCCTGATGATCCCAAGATTGTTATAGCAGGAAAGGTGAAAGGTAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCACGATCTTAAAAGCCCACCATACATATCCACTAACCCATCATTGAATGTCCATAGAATCTCAAATTCCGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTGGAGTCTTATATCTTGAACAATCCTTTTGGTGATCCAGCAAAGTTTCTCATAGAACAGCTTGTAGCTAGAGCAGCTGATTCTGCCGGTCTGAGCATGGAAGAGTTGATGAATATTCCAGCTGGAAGGAGAAGGAAGTACCATGACGACGTGACCGTAATTGTAATCATGCTAGGGATGAATCAGAGGACTTCAAAGGCATCAACTTGCATTTAA 1611 0.4035 MRPASSCRLQVNMLNSEGELKISFGYKCNRDRGIPCEVVSGCKILPGVCRTSSFSCLSGAALSANATLANTNICNGKIGEEILPSWDSPTSFRKVTSSPSLSKLDILSSSPPNSLSYLSCSPSTVSDILEYDSCTLKSMSDPSRSEGFLNAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIISYFNKLIWELEPGSIKAYDKGCLGGSLQYKLDDSLIYHENQSLSRFKGINNSNHGCFAKCNPSTKSEVSCDSFSHGVLDILQRAISQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCGTADRMDKSERLKAIQLTDNHTVDNKVERARLLADHPDDPKIVIAGKVKGKLKVTRAFGVGYLKKKSLNDALMGILRVHDLKSPPYISTNPSLNVHRISNSDQFVIVGSDGLFDFFSNDEAVKLVESYILNNPFGDPAKFLIEQLVARAADSAGLSMEELMNIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0205 536 PANTHER PROTEIN PHOSPHATASE 2C 11 535 IPR015655 GO:0004722|GO:0006470
Gso17g0205 536 Gene3D - 117 532 IPR036457 -
Gso17g0205 536 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 11 535 - -
Gso17g0205 536 SUPERFAMILY PP2C-like 162 524 IPR036457 -
Gso17g0205 536 ProSiteProfiles PPM-type phosphatase domain profile. 148 523 IPR001932 -
Gso17g0205 536 SMART PP2C_4 139 521 IPR001932 -
Gso17g0205 536 Pfam Protein phosphatase 2C 287 478 IPR001932 -
Gso17g0205 536 CDD PP2Cc 161 521 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0205 Gso-Chr17 1915763 1919304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0205 18 536 PP2C-type Phosphatase Gene Family AT3G16560 62.095 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0205 - - gmx:102666789 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2097 7 44842069 44845675 Gso17g0205 17 1915763 1919304 GST
Gso17g0205 17 1915763 1919304 Gso9g0390 9 3800431 3804333 PCT
Gso9g0390 9 3800431 3804333 Gso17g0205 17 1915763 1919304 PCT