Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0175 ATGGCTGTGGAAGCATTGTATTTGTATGATAAACTAACCACAGTCATGACCTCTGATCATGCTTCCGTCGTCTCAATGAACCTTTTTGTTGCTCTTCTCTGCGCTTGCATCATCATCGGTCATTTGTTGGAGGAGAACCGATGGATCAATGAATCCATCACTGCCCTTCTCATTGGTCTCTGTACTGGGGTCTTTATATTGTTTACTACTGGAGGAAAAAGCTCTCATATACTTGTCTTCAGTGAAGATCTTTTCTTCATTTATCTTCTTCCACCCATCATCTTCAATGCCGGGTTTCAGGTGAAGAAGAAACAATTTTTCCTCAATTTTATGACTATAATGCTCTTTGGTGCAGTTGGTACTTTGATATCATTCTGCATAATATCACTAGGTGCCATACACTTTTTTCAGAAATTGGACATTGGTTCCCTGAAGATTGGAGATTTTCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACGTTGCAGGTTCTTAATCAGGATGAGACTCCCTTACTATATAGCCTGGTCTTTGGGGAGGGGGTAGTAAATGATGCTACCTCCGTAGTTCTCTTCAAAGCAATTCAGAATTTTGACCTTTCTCACATTGACTTAACCACTGCCTTGCAATTATTAGGGAATTTTTTGTATTTATTCATTGCAAGCACTGTGTTGGGAATCTTTGCTGGATTGCTCAGTGCATTCATTATTAAGAAGCTCTATTTTGGCAAGTTGATAAGGCATTCTACAGACCGTGAGGTTGCTCTCATGGTACTCATGGCATACCTTTCATATATGCTATCTGAACTATTTTCTTTAAGTGCCATTCTGACTGTTTTCTTCTGCGGCATTGTTATGTCTCACTACACGTGGCATAATGTGACAGAGAGTTCAAGAGTGACAACCAAGCATGTTTTTGCCACTTTGTCATTCATTGCTGAAATCTTTATCTTCCTCTATGTGGGGATGGATGCATTAGATATAGAAAAGTGGCGAATTGTAAGTCAAAGCCCAAGAAAATCAATTGGGGTCAGTTCGTTGCTGTTGGCACTTATCTTAGTGGGAAGAGCTGCATTTGTTTTCCCTTTGTCCTTCTTATCCAACTTGCTTAAGAAGTCTCAATCTGAGAAAATTGAGTTAAAACAACAAGTAACAATTTGGTGGGCTGGTCTCATGCGTGGTGCTGTCTCTATCGCACTTGCTTACAATCAGTTTACCAGGCTGGGCCATACTAAACTGCGGGAGAATGCCATCATGATCACTAGTACCATCACTGTTGTACTCTTCAGCACATTGGCGTTTGGGTTGATGACAAAGCCACTTGTGAGACTATTGCTTCCTTGGTCTAAACACGTAATGAGCTTGCCGTCCCCACCATCGACACCAAAATCATTCACTGTGCCACTTCTTGGCAGTCAAAATGGGCCTCCACCAAGCACCTTGAGGATGCTCCTAAGCTGCATTCCTACTCGTGGAGTTCACCACTATTGGCGCAAGTTTGATGATTCTGTAATGCGACCCGTCTTTGGTGGACGAGGTTTTGTACCCTACGTTCCCGGGTCACCCCTTGAACAAAGTGTTCATCAGTGGCATTGCACTTAA 1611 0.4202 MAVEALYLYDKLTTVMTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALLIGLCTGVFILFTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFLNFMTIMLFGAVGTLISFCIISLGAIHFFQKLDIGSLKIGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLTTALQLLGNFLYLFIASTVLGIFAGLLSAFIIKKLYFGKLIRHSTDREVALMVLMAYLSYMLSELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLLKKSQSEKIELKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLPWSKHVMSLPSPPSTPKSFTVPLLGSQNGPPPSTLRMLLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEQSVHQWHCT* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0175 536 Gene3D - 145 197 - -
Gso17g0175 536 Pfam Sodium/hydrogen exchanger family 30 446 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso17g0175 536 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso17g0175 536 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso17g0175 536 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso17g0175 536 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso17g0175 536 PANTHER SODIUM/HYDROGEN EXCHANGER 8 534 IPR018422 GO:0006812|GO:0015299|GO:0016021
Gso17g0175 536 PANTHER SODIUM/HYDROGEN EXCHANGER 3 8 534 - -
Gso17g0175 536 Coils Coil 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0175 Gso-Chr17 1638017 1642389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0175 8 532 Antiporters AT3G05030 74.074 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0175 - - gmx:100791224 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0175 17 1638017 1642389 Gso17g0175 17 1638017 1642389 ECH
Gso7g2132 7 45141030 45145392 Gso17g0175 17 1638017 1642389 GST