Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0161 ATGTCTCCTTCAGTTTCTTCTCAAGAAAAAGGAAGTAGGAATAAGCGAAAATTCAGAGCTGATCCACCTCTAGGGGAGCCAAATAAGTTTATTCCTGCACCTCAACTCGAGTGCCTCAGTTATGAATTCTCTGCTGAGAAGTTTGAAATAACCCCAGGTCACAGGCAAGTCGCTGCTTGTGACCTGTGTGGTCTTAGCCAAGATCATTCTGATGGACTGAAACTTGGCCTTGGATTGTATAGTCCTGGAACATCTGAGGTCGGGCCTAGTCAATCTAAGGACAAACCTGAGACAGATGAAATTAACGATGCAGATTGGAGCGATCTCACAGAAGCCCAGCTGGAAGAACTTGTCCTGACTAACTTGGACATCATTCTCAAGAGTGCAATTAAAAAAATTGTAGCATGTGGCTACACTGAAGAAGTTGCCACTAAGGCCATTTTAAGACCTGGCATCTGTTATGGATGTAAAGATACTTTGTCTAATATTGTTGATAATACTTTAGCATTTCTTAGAAATGCCCAAGAGATTGATACATTACGAGAGCACTATTTTGAAGATCTAGTGCAGCTTGAGAAGTATGTCTTGGCTGAATTAGTTTGTGTTCTTCAGGAGGTTAGGCCATTCTTCAGTGTTGGGGATGCAATGTGGTGTTTGTTAATTTGTGACATGAATGTGTCACATGCTTGTGCAATGGACTGTAACCCATTAAGTAGTTTAGGTAATGATAATACTACTAGTGCTGGTTCTTCTAGCCAAGCAGAACCACAATCAAAAGCAGAAACCAAATGTCCTGAACTGAGTCTTCTAAGTCCCAGTAAATCAATTCCTGCAGGTTCTCATTATTCTCAATCAAAGAAACCCTTTGTGACTGGAATTCCTGTTGTGAACAACTTGAATTCTCAAATTATTGGTGGAACCTCAGAGAAGGAGGGCGCCAGTTGTGGATCTGAGTGCATTAATAAAGCATTCAGTGCTGCAGGAACATCTCAATCTGGCCTGATGGAAGAAAAGCGTGGAACAGTTAGAAAGGTTCATTCTGGTAGCACCATGAGAGACTACGTTCTTCGACACAAGTCATTTCACGTAGAAAAAAAATTTCGTACTTATGAATTAAAAGGATCTTCAAGAGGAGGAAAGGTTAATGGCCTGAGTGGTTTAGTCTTGGATAAAAAACTTAAATCTGTGTCAGAATCTTCTACCATAAACTTAAAGAGTGCATCCTTACAGATAAGTAAGGCAATGGGCATTGATACTACTCAAGACAATATTAATGTTAACTTCTCCAGTAATGCTGGGACTTCTACCTCCACTGCATTTAGCCCGGTGGATTCTTCTAATGCTGTTTGTAGATCAACCAATACTTCATTTGCAATAAATGCAGCACATACTATACCTTTATTCAGTTGTCCAGCTTCATTATCAGCTACCAATACAGATCTTTCTCTCTCATTGTCTTCAAAAATCAAGCCTTCTACGGAATCTGTCTGCAGTAATAATGAAGCACCTAATAGTAGTTATATGGGAATACCGTATAATAATATTAAGTCCCCAAGGCAGTGGATACCACAGGATGGAAAGGATGAGATGCTTTTAAAACTGTTTCCAAGGGTTCAGGAGCTGCAAAATCAGCTTCAAGAATGGACAGAGTGGGCCAATCAGAAGGTTATGCAAGCTGCTTGTCGTCTGAGTAAGGAAAAGGCTGAGCTTCAGACACTAAGGCAAGAGAAAGAGGAAGTTGAACGTCTAAAAAAAGAGAAGCAATCTCTAGAGGAAAATACCTTGAAGAAGCTTTCTGAGATGGAAAATGCCCTGTGTAAAGTTAGTGGGCAGGTAGAGCGAGCTAATGCCGCTGTCCGGAAGCTCGAAGTGGAGAAGGCTGCATTGAGGAAAGAGATGGAGGCTGCTAAGATACATGCCACAGAAACCGCTGCAAGCTGTCAAGAGGTCTCAAGGAGGGAAAAGAAGGCACAAATAAAGTTTCAGTCATGGGAAAAGCAGAAATCCTTCTTTAAGGAAGAGCTAACGATTGAAAAACAAAAATTGGCTCAGCTGCTGCATGAATTAGAACAAGCTAGAGTGCAACAGGAGCAAGTTGAGGGTAGATGGCAGCAGGAAGCAAAGGCAAAGGAAGAACTTATCCTGCAGGCCAGTTCTATAAGAAAGGAAAGAGAACAAATTGAGGAATCAGGAAAGTCCAAGGAGGATGCGATCAAATTAAAAGCAGAGAGGAATCTGCAAAGTTACAGAGACGACATCCAAAAACTTGAAAAGGAAATTTCCCAACTAAGACTGAAGACTGACTCTTCAAAAATTGCTACACTGAGGATGGGCATTGATGGATGCTATGCCAGAAAATTCTTGGACATAAAAAATGGCACTGCTCAGAAGGAACCCTGGGCTTCTTTCATCTCAGAACTAGTCATTGACCACTCAGCAACTGGCAGTGTAAAACGGGAACGAGAATGTGTGATGTGTCTTTCAGAGGAGATGTCTGTTGTATTCCTCCCATGTGCTCATCAGGTTGTTTGCACACCATGTAATGAGCTCCATGAGAAGCAGGGTATGCAAGATTGTCCTTCTTGCAGGAGCCCTATCCAACAGCGTATTGCTGTGCGCTTTCCACGCTATTGA 2634 0.4176 MSPSVSSQEKGSRNKRKFRADPPLGEPNKFIPAPQLECLSYEFSAEKFEITPGHRQVAACDLCGLSQDHSDGLKLGLGLYSPGTSEVGPSQSKDKPETDEINDADWSDLTEAQLEELVLTNLDIILKSAIKKIVACGYTEEVATKAILRPGICYGCKDTLSNIVDNTLAFLRNAQEIDTLREHYFEDLVQLEKYVLAELVCVLQEVRPFFSVGDAMWCLLICDMNVSHACAMDCNPLSSLGNDNTTSAGSSSQAEPQSKAETKCPELSLLSPSKSIPAGSHYSQSKKPFVTGIPVVNNLNSQIIGGTSEKEGASCGSECINKAFSAAGTSQSGLMEEKRGTVRKVHSGSTMRDYVLRHKSFHVEKKFRTYELKGSSRGGKVNGLSGLVLDKKLKSVSESSTINLKSASLQISKAMGIDTTQDNINVNFSSNAGTSTSTAFSPVDSSNAVCRSTNTSFAINAAHTIPLFSCPASLSATNTDLSLSLSSKIKPSTESVCSNNEAPNSSYMGIPYNNIKSPRQWIPQDGKDEMLLKLFPRVQELQNQLQEWTEWANQKVMQAACRLSKEKAELQTLRQEKEEVERLKKEKQSLEENTLKKLSEMENALCKVSGQVERANAAVRKLEVEKAALRKEMEAAKIHATETAASCQEVSRREKKAQIKFQSWEKQKSFFKEELTIEKQKLAQLLHELEQARVQQEQVEGRWQQEAKAKEELILQASSIRKEREQIEESGKSKEDAIKLKAERNLQSYRDDIQKLEKEISQLRLKTDSSKIATLRMGIDGCYARKFLDIKNGTAQKEPWASFISELVIDHSATGSVKRERECVMCLSEEMSVVFLPCAHQVVCTPCNELHEKQGMQDCPSCRSPIQQRIAVRFPRY* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0161 877 Coils Coil 739 773 - -
Gso17g0161 877 SUPERFAMILY RING/U-box 818 870 - -
Gso17g0161 877 Coils Coil 556 600 - -
Gso17g0161 877 Pfam Zinc finger, C3HC4 type (RING finger) 820 868 - -
Gso17g0161 877 Coils Coil 612 639 - -
Gso17g0161 877 Coils Coil 672 702 - -
Gso17g0161 877 ProSiteProfiles Zinc finger RING-type profile. 823 863 IPR001841 -
Gso17g0161 877 PANTHER OS05G0141500 PROTEIN 1 874 - -
Gso17g0161 877 Pfam Family of unknown function (DUF6592) 125 232 IPR046527 -
Gso17g0161 877 PANTHER OS05G0141500 PROTEIN 1 874 IPR046934 -
Gso17g0161 877 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 807 873 IPR013083 -
Gso17g0161 877 Coils Coil 710 730 - -
Gso17g0161 877 MobiDBLite consensus disorder prediction 245 264 - -
Gso17g0161 877 MobiDBLite consensus disorder prediction 245 259 - -
Gso17g0161 877 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0161 Gso-Chr17 1512679 1517134 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0161 17 1512679 1517134 Gso17g0161 17 1512679 1517134 ECH
Gso7g2148 7 45282679 45287665 Gso17g0161 17 1512679 1517134 GST
Gso17g0161 17 1512679 1517134 Gso15g0848 15 7806615 7810880 PCT
Gso17g0161 17 1512679 1517134 Gso11g2416 11 40186177 40190464 PCT
Gso15g0848 15 7806615 7810880 Gso17g0161 17 1512679 1517134 PCT
Gso11g2416 11 40186177 40190464 Gso17g0161 17 1512679 1517134 PCT