Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0160 ATGGGTTGTGTCCATGGCAAGTGTTGCTGTGGTGACAGTTCTTCATCAGATGATGGTTCTAGGGATTACCGAGAACTTGACTTCATTAATGGCCACAGGAAGAACGTGCTCGCTCAGCGGTCATTGAAGCATGTTCCTGTTCCTTCCCACAACTTCATTTTGGAATACACTTTTCTCACTCAGCGGGGGTACTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTTTCTGCATTACTACACAACTCCAAAGTAACCCCAATGTCCATTTCTTTGGTGTCTATGATGGGCATGGCCAATTTGGTAGCCAGTGTTCCAATTTCGTTAAGGATAGGTTGGTAGAGAAGTTGTCAAATGACCCTGCATTGTTGGAGGACCCTGCTCAGGCTTACAATTCTGCATTCGTGGCAACGAATCAAGAATTGCGTAGTACTAGTGAGATTGATGATTCTATGAGTGGCACCACCGCGATTACGGTGCTTGTTATTGGTGACACTCTTTATGTTGCTAATGTTGGTGATTCAAGAGCGGTGCTGGCCGTTAAGGATGGCAATCACATTGTTGCCCAGGACTTGTCCTCTGACCAGACGCCATTTCGGAGAGATGAATATCAGAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTAAAGGATCCAGATATCCAGCATTGGGGTGATGAAGAGAGTTGGGGTGGTGATCCTCCTAGATTGTGGGTTCCTAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTATAGGGGATAGTTTGGCGGAGACTGTTGGTGTCATTGCTATTCCGGAGGTGAAAGCGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTGGCAAGTGATGGCATATTTGAATTCCTGACAAGCCAAACTGTTGTTGATATGGCAGCAAGCTATATGGATCCTCATGATGCATGTGCAGCTATTGCAGAGAAGTCGTATAAACTATGGTTGGAACTTGAGAACAGAACAGATGATATAACAATCATCATTGTTCAGATCAAAGGTCTTTCTAATTCAGGTACATCTGGAGTTGGATCAGATGAGATCAATGGTGGTACTGTAATGAATTTCAGGACAGGAACTCCTGAGATATCTGCTACCCCTGGATCTAATGTTTATTGTTCAGTCAGAACCAGTTTCTCTGATTTGCACTCCGGTCAGGATGCGGCTTCAGTGACGAGTGCAGTCATAGAGGTTCACTCTCCAGCATGTCCAAGACCAATTGAATGA 1269 0.4476 MGCVHGKCCCGDSSSSDDGSRDYRELDFINGHRKNVLAQRSLKHVPVPSHNFILEYTFLTQRGYYPDSPDKENQDSFCITTQLQSNPNVHFFGVYDGHGQFGSQCSNFVKDRLVEKLSNDPALLEDPAQAYNSAFVATNQELRSTSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNHIVAQDLSSDQTPFRRDEYQRVKLCGARVLSVDQVEGLKDPDIQHWGDEESWGGDPPRLWVPNGMYPGTAFTRSIGDSLAETVGVIAIPEVKAVQLTPNHLFFVVASDGIFEFLTSQTVVDMAASYMDPHDACAAIAEKSYKLWLELENRTDDITIIIVQIKGLSNSGTSGVGSDEINGGTVMNFRTGTPEISATPGSNVYCSVRTSFSDLHSGQDAASVTSAVIEVHSPACPRPIE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0160 422 Pfam Protein phosphatase 2C 76 323 IPR001932 -
Gso17g0160 422 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 34 369 - -
Gso17g0160 422 Gene3D - 54 348 IPR036457 -
Gso17g0160 422 SMART PP2C_4 51 344 IPR001932 -
Gso17g0160 422 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Gso17g0160 422 ProSiteProfiles PPM-type phosphatase domain profile. 55 346 IPR001932 -
Gso17g0160 422 CDD PP2Cc 71 346 IPR001932 -
Gso17g0160 422 SUPERFAMILY PP2C-like 46 348 IPR036457 -
Gso17g0160 422 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 34 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0160 Gso-Chr17 1507265 1510814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0160 1 351 PP2C-type Phosphatase Gene Family AT3G06270 70.655 8.02e-175 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0160 - - gmx:100797866 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0160 17 1507265 1510814 Gso17g0160 17 1507265 1510814 ECH
Gso7g2149 7 45288830 45292473 Gso17g0160 17 1507265 1510814 GST
Gso17g0160 17 1507265 1510814 Gso15g0852 15 7841854 7846096 PCT
Gso17g0160 17 1507265 1510814 Gso11g2412 11 40152992 40157169 PCT
Gso15g0852 15 7841854 7846096 Gso17g0160 17 1507265 1510814 PCT
Gso11g2412 11 40152992 40157169 Gso17g0160 17 1507265 1510814 PCT