Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0148 ATGCCTCATGATCAGAGAAAAAAGTCATCTGTAGATATAGACTTCTTTACAGAATACGGTGAAGGGAGTAGATACAAAATAGAGGAAGTAATAGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACCGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACGCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCTTACGCCATCCTGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAGTTCAAAGATATATATGTTGTTTTTGAACGTATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCCAGAGCATTATCAGTTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACCGAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAATATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTCGGTCTTGCCAGAGTGGCTTTCAATGATACACCAACTGCTATATTTTGGACAGATTATGTTGCAACAAGGTGGTATAGAGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACCCCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAACACCGTCTCCTGAAGCCATTGCTAGGGTACGGAATGAGAAAGCTCGGAGATACTTGAGTAGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCCCAAAAGTTTCCTAATGTAGACCCCCTTGCTCTTCGTGTGTTACAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCAGATTCTTATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCCCAGCCAGTTACCAAGATAGAATTTGAATTCGAGAGACATAGGATAACAAAGGAAGACGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCGAAGATGTTAAAAGAACATCTAGAGGGAGCCGAGCCAACAGGATTCATGTATCCAAGTGCGGTGGATCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGAAAAGGTGGAACTGTTACTCCACCCGAGAGGCAACATGCATCATTACCCAGGTCATGTGTGTTGTATTCAGATAACTCAAGACCAAATATGGCTGAGGTTGCAGATGATATCTCCAGGTGTAGCATCAAAGAAGTTGAGAAGCCAGCCATGGACAGGACTGGTGGTATCCCAATGGCCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTGATGACTGATCGTAGCGTTGCTGCATGGCCCAGAAAAGGTGTAGGTTCTGTATTGCATTACAACAACTGTGGGGTAGCAGTTACAGCTGTTGCTGAGCAGCGGAAGATGGGTAGAAATCCGTCTGTTTCAGCCCAGTATGCTGCTCCAAGCAGTTCATATCCAAGACGAAACCCAAGCTGTAAAAGTGAGAAGGTGGAAGAGGGGATTGAAGGTGCTAATGGACTTCAGACTAAGCCTCAGTACATAGCACGAAAAGTTGTTGCTGCTGCTCAAGGGGGACCTGGTGGTAATTGGTATTGA 1707 0.4282 MPHDQRKKSSVDIDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFERMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHRANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNVDPLALRVLQRMLAFEPKDRPTAEEALADSYFKGLAKVEREPSAQPVTKIEFEFERHRITKEDVRELIYREILEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRSCVLYSDNSRPNMAEVADDISRCSIKEVEKPAMDRTGGIPMARLPLQAPQNIQGVMTDRSVAAWPRKGVGSVLHYNNCGVAVTAVAEQRKMGRNPSVSAQYAAPSSSYPRRNPSCKSEKVEEGIEGANGLQTKPQYIARKVVAAAQGGPGGNWY* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0148 568 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0148 568 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0148 568 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 470 - -
Gso17g0148 568 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Gso17g0148 568 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g0148 568 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gso17g0148 568 MobiDBLite consensus disorder prediction 505 541 - -
Gso17g0148 568 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 9 470 - -
Gso17g0148 568 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso17g0148 568 MobiDBLite consensus disorder prediction 507 527 - -
Gso17g0148 568 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Gso17g0148 568 CDD STKc_TDY_MAPK 24 361 - -
Gso17g0148 568 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0148 Gso-Chr17 1395320 1407954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0148 1 568 MAP Kinase Gene Family AT5G19010 77.241 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso17g0148 Pkinase 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0148 - K04371 gmx:100781650 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0148 17 1395320 1407954 Gso17g0148 17 1395320 1407954 ECH
Gso7g2161 7 45370039 45376755 Gso17g0148 17 1395320 1407954 GST
Gso17g0148 17 1395320 1407954 Gso15g0867 15 7987758 7994019 PCT
Gso17g0148 17 1395320 1407954 Gso11g2399 11 40010388 40016857 PCT
Gso15g0867 15 7987758 7994019 Gso17g0148 17 1395320 1407954 PCT
Gso11g2399 11 40010388 40016857 Gso17g0148 17 1395320 1407954 PCT