Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0134 ATGACCAGCTCAGCGGTTACGGAACAATTTGACAAATGCATGAAGAAGCAAGTAGAAGCAATTGCACGAGTTTTGCATTTATTTCAATCCTACAAAGAGGACAATATTCCGTGCAAAATCGACGAGGGTCTCTATTTGGGTTCGATTGCCACTGCAGCTAACAAGCCTGCTTTGAAAGACTGTAATATTACTCACATTTTGACTGTGGCTGGTAGAATACCACCTGCACATCCTAACGATTTTGTCTATAAAATTATAGACGTTGTTGACAGAGATGATGAAGACTTAAAACAATACTTCAATGAGTGTTTTGATTTTATTGATGAAGCCAAAAGACTCGGTGGAGGTGTTTTGGTTCATTGTTTTGCTGGAAGATCAAGGAGTGTGACTATAGTTGTGGCATATCTGATGAAGACTCGAGGAATGAGTTTTTTTGAAGCTCTGAAACATGTGAAGAGTATACGACCAGCAGCAGGTCCCAATCAGGGTTTCATTTGTCAGCTGGAGGACTTTGAAAAGTCTCTTCAAGGTGCCAATAAATTGCATTAG 549 0.3989 MTSSAVTEQFDKCMKKQVEAIARVLHLFQSYKEDNIPCKIDEGLYLGSIATAANKPALKDCNITHILTVAGRIPPAHPNDFVYKIIDVVDRDDEDLKQYFNECFDFIDEAKRLGGGVLVHCFAGRSRSVTIVVAYLMKTRGMSFFEALKHVKSIRPAAGPNQGFICQLEDFEKSLQGANKLH* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0134 182 Pfam Dual specificity phosphatase, catalytic domain 44 173 IPR000340 GO:0008138|GO:0016311
Gso17g0134 182 PANTHER BNAA01G23680D PROTEIN 9 180 - -
Gso17g0134 182 Gene3D Protein tyrosine phosphatase superfamily 38 182 IPR029021 -
Gso17g0134 182 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 98 156 IPR000387 GO:0016311|GO:0016791
Gso17g0134 182 CDD DSP 37 170 - -
Gso17g0134 182 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 9 180 - -
Gso17g0134 182 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 177 IPR020422 GO:0006470|GO:0008138
Gso17g0134 182 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 179 IPR029021 -
Gso17g0134 182 SMART dsp_5 36 174 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0134 Gso-Chr17 1225355 1228346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0134 38 177 Protein tyrosine phosphatase (PTP) family AT3G06110 60.714 1.09e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0134 - - gmx:100306342 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0134 17 1225355 1228346 Gso17g0134 17 1225355 1228346 ECH
Gso7g2179 7 45550793 45553700 Gso17g0134 17 1225355 1228346 GST