Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0119 ATGGATTGCAACGAGGCTCCCTCTCCTTCTCCCTCTCTCCATTCTTCGTCGCTTCTGAAGGACATTTCCAACTTCACAACCCCCAGACGCCCCCCTTTCTCTCTCACCGCCGCCAAATCTCCCGCCACCCAATTCTTCACCGCCTCCAAACACGGCACCTCCTCCTTCCACCGCCGCCCCAACAAATCATCCACCGCCGCCTCCAAGAAACTCAAGGCCTTCCAATTGGAGCAGTTCCAGTCCTCCCGCAAGGCTCAAATCAAGAAGGAACACTCCCTCAAATCCCTCTCCAAGTCCCTCTCCGTCTGGCTCAACTTCCTCCTCCAAAACCCTACCTCCTGCGGCTGCCACCTCTCAGCCTCCAATGCCGCCCCCGCTCCCGCCACCAACGGCAAGCGACACGGCGCTCCGGGAACCTCTGTTGTCGGCGTCGATTCCACTTGGCGAACTCCCAAGCGCCAGAGGAAGACCTGGTCCACTAAGAAAAGTGCCGCCACTGCAGCGGAGGTTCCTGATTCCTCGTTTTCGCAACTCAGTGATTCTCTCAAGGACGTGTGCAGTTTCGACGATTTGAAGCAGCGAATGAGGGTTTATCTCAGCCTCGCAGCATGTAAAGAGATCTTCCATCAAATGAATCGCGTCACCAAGACTATTGACGAAGGAAGGCTCAATATGAAGGCGCATTGCCCTATAGTAACTGATGTAGGCTTGAAGACTAAGGCCACGAGAATTCTCATGTGTTATAATCCTATTTGGCTGCGGATTGGATTGTATATAATTTTTGGTGGTGACTCCTTGGTGTTGAATGGTGATGTTGATTCTGATCAGGATGTTGTGTTCTTGAAAATGGTCATTGACAAGCTATTTTTTTCACATGAGGGTTTAGCTAAAGAGTATGCTTATAATAAGATGGTTGAAAGTGTATATAGGTCGGGTTACTATGAGAATTTGGGGAATGTGATTTTGAAGAGAATTTTGTTACTTGTGCTTGTCCTGGATAAAGCTAAATGCCAGAGTTACCTCCCACTGGAGTACGGTATTGATGGGTTGGATGGGGGTTCCCCTTTGTTATTAAAACCAGAATCCTGGATTAAATCAAGTAGTCAGCTGATTCATGAATTTCTATCGTCTGATGTAATGCATGGAGAAGGCAATCTTCTAACACATTTGGTGATTTTAGGTTACAAATTATCTCATCAACAGGAACCTATTGTTGAGTATGATTTTAGGGTCAGAGATTTATTTGTAGATCTCCAAGATGGATTGAAATTGTGTAGAGCAATTCAGCTCTTGCAGCATGATTCTTCAATCCTCATGAAAATCGTAGTTCCCTCTGATACTCCAAAGAAAAAATTGGCAAACTGTGGTCTTGTCCTACAATATATTAGGCATTCTGGTGGGTCACTACTTGATGAAGATGGCATCATGATTGTGGCAGAGGATATTGTTAATGGAGACAAAGAACTTACACTTTCCTTGCTGTGGAATATGTTTGTTCATTTGCAGCTACCTCTTTTGGTTGATAAGACAAGTCTAGTTGGGGAAATTTCAAAAATTCGAGGATTTGACACGGATCTCATAAACAATGCAAATTCTAGTTCTATGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGACAATTATGATTGTGCAATTGACAATTTTCATTCCCTTGTTGATGGCAAAGCTATCTGGTGCCTACTTGATTATTACTTCCAGAAAGAACTTCATAATTCCTGTTCATTGAAGGAAGTTAATAAGAAAAGTGGCAAGGCATCAATTATGTCGGTGAATGAATATTCAGATGCACTATATAATTTTATATTATCCCAAAAGTTGACTACATTACTGGGGAACTTCCCAGAGGTGCTTCAAATTAGTGAGCTACTTCAACATAATGGTGCTTGCAGTGATCGAAGTGTGGTGATTTTGTTGGTTTTCCTAGCAAACCAATTATTTGTTAAGAAAAATTTGGATCACTTAAATTTCCATAAGCTCTTGGGTTATGACTGCCAAAGTCCAAACCATAGACATTTGAGGTTGCTGCGATGCCTTTCAAATTCTGAATCAATACAAAAGCCTGATGCTTCTGATGTGCATGGAAATGAAGATGGTGCGAGAAAATTCAAGGCTATCCAAGCTTGGTGGCAAGATATGGCTGAAAGAAACTGTATCAACAAACCTGCTGTCTCTAATTTGCAGAGATCCAGTACCACTGAATGCAGCACCAACATTAGAAGAGAAAATGCTGCAAGAACAATACAACTGCATTTCAGAGGATTGGTTGCACGGCGCAAGTTTCTGAAGATGATAAATGCTGTTACCTTTTTGCAAACTGGTTTCAGAGCTTGGCTACAAGTGAGGCAAGGGTCAGTCTGCATGATGTTATCAACTGTTCAAGTCTGTGACTCTTCATGTGAAATATTGAAGCAATCAGAAACATATAAGAGATATGCCATGCTTTTCATTCATAGACATTCATTTTTGAGGTTGAAGAGGTCAGCACAGCTTATCCAGCAAGCAGTTAGGAGTTGGCTCTATCGGAGGCATCAGCAAGAATGTAGTACAAGTCCTGATCTCATGATTTCAGATATGGTGGCAGCTACTATTACTGTTCAGAAATTTGTCCGTGGTTGGCTGGCACGATCTAGATATATTCATCAGCTAGATCAGAAAGAGAAATCTTTAAATTGTTCCCAACAGAAAGTCACTTTTGATCTTCAAACAAATGCAGCAATTATCATTCAGCTTGCATGGAAAAGGTTCATATGCTGCAAATCTACTCAGAAGCAACACCTGCTTGCAACTAAAATTCAACGAAATTTCCGTAGGTGGTTGTTGAGAAAAAGTTTTTCAAATCAAATTCAAGCTGTCATCAAAATTCAATCTTATTTTCGAAGGTGGAGATGTGTAAATGCTTTTCAGCACTTCAAAATTGAGTATAAGGCAGCTGTTGTCATTCAATCTTTCTTACGGGGATGGTTTGCACGAAAGAATGCTTGTGCGCATAGTAATCACCTCTTTGCTACTAAAATTCAACGAAATTTCCGTATGTGGTTGTTGAGAAAAAGTTTTTTGAATCAGATTCAAGCTGTCATAAAAATTCAATCGTACTTTCGAATGTGGAGATGTGCGATGGCTTTTAAGCACTTCAAAATCGAGTTTAAGGCAACTATTGTTATTCAATCTTTCTTACGGGGCTGGTTTGCACGAAAGGATACTTGTGCGCGTAGAAATCACATTGTTGAAATTCAAAGGCATTGTCGTGGTTGGCTAGTGAAGCGGGACTTCTTGTTCCAAAGAGATGCTGCAGTAAAGATCCAGTGTGCTATTCGAAGCTTGAAGTGTCAGAAGGCTCTCAATTGCCTGAAAGATGCTGCTTTGGAGATTCAATGCTTTATAAGGGGGCATTTAACTCGGAATCAGCTATTAGGTAGTGCTTCCAAGTCATACACAGCTATTCCTATTAGTTGCATTTCAAGACCATTTGGCTTTTGTTGTTTTCAACTGGAACTATTCTTGTTTTCGGTTGTGAAATTGCAACGGTGGTGGAAGGGTCTCTTGTTGCTTAAACTAAAGAATAAATCAGCCATCATTATTCAGTCATGTACCCGTGGGTGGATAGCCAGGCGAAAGGCCACTGTTTTCAGACAACATGTCATCCAAGAAGATGCCGCATTGGTGATTCAATGCTATATTAGGGGGCATTTAACTCAAAATTGGAATTTAGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTACAGAAATTGATGACAAAGTCTGCCATTGTTATTCAGTCTTGTGCTCGTGGGTGGATAGCCAGGCGAAAGGCTACTATTCAGAAACATCGTATTATTGTCATCCAATCCCACTGGAAAGGTTACCTTGTACGTAAAGAGTCAAAAGAACAGTTATTGGATTTGCGTTTGAGGATGCAGAAGTCTGCTAGAAATGTGGATGACAGCAAGCGTCTCATAAACAGACTCTTGGCAGCGCTTTCAGAGCTACTTAATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCAACATTGGATATGGCTACAGGACATTCTAAGAAATGTTGTGAAGAACTTGTGGCTGCAGGGGCTATCAACACCTTGTTGCAGCTAATTCAAACAGTCAGCCGGAGTATACCTGACCAGGAGGTTCTAAAGCATGCTTTGTCAACTCTCCGAAATCTCGCTCGCTATCCTCATCTACTACAAGTGTTGATCCAGAGTCGTAGTTCTGTTCAGATAATTGTCTTGGAGTTATTGAGGAATAAAAATGAGGGCTATTTCGTTGCTTCTGAACTTTTGAAGAAGATATGTTCAACTCGGGTAGGCCTTGAGACAATATTCAAGTCCCCTGCCCTGCTAAAACGATTGCACAGTCTTGTTGAGGACCTTACACGGAAGGGAATTTACGAGAAAAGAAATCCTAGGGCTCCTAGGCATATCAAAGAAAACAGAGAGAGAAGATTGAAGGAGGCTGCTGAGATTCTGAAGCTGATAACAAGCGCTTGA 4539 0.4188 MDCNEAPSPSPSLHSSSLLKDISNFTTPRRPPFSLTAAKSPATQFFTASKHGTSSFHRRPNKSSTAASKKLKAFQLEQFQSSRKAQIKKEHSLKSLSKSLSVWLNFLLQNPTSCGCHLSASNAAPAPATNGKRHGAPGTSVVGVDSTWRTPKRQRKTWSTKKSAATAAEVPDSSFSQLSDSLKDVCSFDDLKQRMRVYLSLAACKEIFHQMNRVTKTIDEGRLNMKAHCPIVTDVGLKTKATRILMCYNPIWLRIGLYIIFGGDSLVLNGDVDSDQDVVFLKMVIDKLFFSHEGLAKEYAYNKMVESVYRSGYYENLGNVILKRILLLVLVLDKAKCQSYLPLEYGIDGLDGGSPLLLKPESWIKSSSQLIHEFLSSDVMHGEGNLLTHLVILGYKLSHQQEPIVEYDFRVRDLFVDLQDGLKLCRAIQLLQHDSSILMKIVVPSDTPKKKLANCGLVLQYIRHSGGSLLDEDGIMIVAEDIVNGDKELTLSLLWNMFVHLQLPLLVDKTSLVGEISKIRGFDTDLINNANSSSMELLLNWIQAVCDNYDCAIDNFHSLVDGKAIWCLLDYYFQKELHNSCSLKEVNKKSGKASIMSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQHNGACSDRSVVILLVFLANQLFVKKNLDHLNFHKLLGYDCQSPNHRHLRLLRCLSNSESIQKPDASDVHGNEDGARKFKAIQAWWQDMAERNCINKPAVSNLQRSSTTECSTNIRRENAARTIQLHFRGLVARRKFLKMINAVTFLQTGFRAWLQVRQGSVCMMLSTVQVCDSSCEILKQSETYKRYAMLFIHRHSFLRLKRSAQLIQQAVRSWLYRRHQQECSTSPDLMISDMVAATITVQKFVRGWLARSRYIHQLDQKEKSLNCSQQKVTFDLQTNAAIIIQLAWKRFICCKSTQKQHLLATKIQRNFRRWLLRKSFSNQIQAVIKIQSYFRRWRCVNAFQHFKIEYKAAVVIQSFLRGWFARKNACAHSNHLFATKIQRNFRMWLLRKSFLNQIQAVIKIQSYFRMWRCAMAFKHFKIEFKATIVIQSFLRGWFARKDTCARRNHIVEIQRHCRGWLVKRDFLFQRDAAVKIQCAIRSLKCQKALNCLKDAALEIQCFIRGHLTRNQLLGSASKSYTAIPISCISRPFGFCCFQLELFLFSVVKLQRWWKGLLLLKLKNKSAIIIQSCTRGWIARRKATVFRQHVIQEDAALVIQCYIRGHLTQNWNLVVKLQRWWKGLLLQKLMTKSAIVIQSCARGWIARRKATIQKHRIIVIQSHWKGYLVRKESKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSTLDMATGHSKKCCEELVAAGAINTLLQLIQTVSRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRSSVQIIVLELLRNKNEGYFVASELLKKICSTRVGLETIFKSPALLKRLHSLVEDLTRKGIYEKRNPRAPRHIKENRERRLKEAAEILKLITSA* 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1225 1240 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 868 886 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1262 1280 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1126 1144 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1196 1213 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 957 975 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 983 1000 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1010 1026 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1082 1098 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 750 768 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1057 1074 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1287 1303 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 936 952 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1102 1120 IPR000048 GO:0005515
Gso17g0119 1512 Pfam IQ calmodulin-binding motif 1031 1048 IPR000048 GO:0005515
Gso17g0119 1512 Gene3D - 396 502 IPR036872 -
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 981 1010 IPR000048 GO:0005515
Gso17g0119 1512 Pfam Calponin homology (CH) domain 410 500 IPR001715 GO:0005515
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 748 776 IPR000048 GO:0005515
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 1078 1107 IPR000048 GO:0005515
Gso17g0119 1512 PANTHER UNCHARACTERIZED 8 1000 - -
Gso17g0119 1512 PANTHER UNCHARACTERIZED 1244 1511 - -
Gso17g0119 1512 PANTHER UNCHARACTERIZED 1004 1240 - -
Gso17g0119 1512 Gene3D - 1311 1481 IPR011989 -
Gso17g0119 1512 Gene3D - 1056 1101 - -
Gso17g0119 1512 Gene3D - 1192 1244 - -
Gso17g0119 1512 Gene3D - 1006 1055 - -
Gso17g0119 1512 Gene3D - 747 794 - -
Gso17g0119 1512 Gene3D - 1102 1149 - -
Gso17g0119 1512 Gene3D - 1259 1308 - -
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 1055 1084 IPR000048 GO:0005515
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 1284 1312 IPR000048 GO:0005515
Gso17g0119 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1075 IPR027417 -
Gso17g0119 1512 MobiDBLite consensus disorder prediction 48 67 - -
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 1010 1035 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1193 1215 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 908 930 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1283 1305 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1123 1145 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 865 887 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 931 953 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 954 976 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1260 1282 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1028 1050 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 980 1002 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 770 792 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1054 1076 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1222 1243 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 831 853 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1005 1027 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 747 769 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1077 1099 IPR000048 GO:0005515
Gso17g0119 1512 SMART iq_5 1100 1122 IPR000048 GO:0005515
Gso17g0119 1512 MobiDBLite consensus disorder prediction 8 25 - -
Gso17g0119 1512 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1244 1511 - -
Gso17g0119 1512 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 8 1000 - -
Gso17g0119 1512 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1004 1240 - -
Gso17g0119 1512 ProSiteProfiles Calponin homology (CH) domain profile. 380 502 IPR001715 GO:0005515
Gso17g0119 1512 SUPERFAMILY ARM repeat 1330 1474 IPR016024 -
Gso17g0119 1512 Gene3D - 908 952 - -
Gso17g0119 1512 Gene3D - 955 1001 - -
Gso17g0119 1512 Gene3D - 831 886 - -
Gso17g0119 1512 SUPERFAMILY Calponin-homology domain, CH-domain 323 576 IPR036872 -
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 1124 1153 IPR000048 GO:0005515
Gso17g0119 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1307 IPR027417 -
Gso17g0119 1512 MobiDBLite consensus disorder prediction 1 25 - -
Gso17g0119 1512 Gene3D - 529 654 IPR036872 -
Gso17g0119 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 936 1000 IPR027417 -
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 1261 1288 IPR000048 GO:0005515
Gso17g0119 1512 Pfam Armadillo/beta-catenin-like repeat 1363 1407 IPR000225 GO:0005515
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 1194 1223 IPR000048 GO:0005515
Gso17g0119 1512 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1373 1406 IPR000225 GO:0005515
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 866 895 IPR000048 GO:0005515
Gso17g0119 1512 SMART arm_5 1362 1407 IPR000225 GO:0005515
Gso17g0119 1512 ProSiteProfiles IQ motif profile. 932 961 IPR000048 GO:0005515
Gso17g0119 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1144 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0119 Gso-Chr17 1100539 1111022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0119 962 1130 Myosins gene family AT1G04160 30.409 4.32e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0119 K16743 - gmx:100817636 2929.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2198 7 45693207 45703759 Gso17g0119 17 1100539 1111022 GST