Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0106 ATGGCTCCCAAGGGTTTAATCTTTTTGGCTGTGTTATGCTTCTCAGCACTGTCACTGAGTCGTTGTCTTGCGGAGGATAATGGACTTGTTATGAACTTCTACAAGGAATCATGCCCTCAGGCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCCTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCACTGTTGCTGGACTCCACAAGAAGGAGCTTGTCTGAGAAGGAAACAGATAGAAGCTTTGGGTTGAGAAATTTCAGGTACATTGAGACCATCAAAGAAGCTTTGGAAAGGGAATGCCCAGGAGTTGTTTCCTGTGCTGATATCCTCGTTCTCTCTGCCAGAGATGGCATTGTTTCGCTAGGAGGTCCCCATATCCCTCTTAAAACAGGAAGAAGGGATGGTAGAAGGAGCAGAGCCGATGTGGTAGAGCAGTTCCTCCCAGACCACAATGAATCCATTTCTGCAGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACCCCCGGCGTAGTTGCATTGCTTGGAGCACACAGTGTTGGTCGAACCCATTGTGTGAAGTTGGTGCACCGTTTGTACCCAGAGATTGATCCAGCTCTGAACCCTGACCACGTCCCTCACATTCTGAAGAAGTGCCCTGATGCCATTCCAGACCCTAAGGCCGTGCAGTACGTGAGAAACGACCGTGGCACCCCCATGATTCTAGACAACAATTACTACAGAAATATATTGGACAACAAGGGCTTGTTGATAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAGTTTTCTAGAGCCATTACTTTGCTCTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGAAAGCAGTGCAATGCTGCCAACAAGCACCATGAGGAGCCTTAA 996 0.4749 MAPKGLIFLAVLCFSALSLSRCLAEDNGLVMNFYKESCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDPALNPDHVPHILKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNAANKHHEEP* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0106 331 Gene3D - 32 325 - -
Gso17g0106 331 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PANTHER PEROXIDASE 42 24 324 - -
Gso17g0106 331 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Gso17g0106 331 Gene3D Peroxidase, domain 2 165 304 - -
Gso17g0106 331 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0106 331 PANTHER PEROXIDASE 25-RELATED 24 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0106 Gso-Chr17 1025158 1027580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0106 1 328 Peroxidase AT4G21960 80.000 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0106 K00430 - gmx:547513 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2208 7 45764552 45766868 Gso17g0106 17 1025158 1027580 GST