Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g0090 | ATGTTCCCTGCCTTAGGATTTCCGGTCAACCTTAGCCCCTCCGATCCCAACCATCGGACGGTCCTTGCTGAAGTTGACTTCCTCTCCGCTAGAAACAATTCATCACCTCACACTAACGATCATGGAACCCCTCCTAAGTCTTATCCCCATGTAAATACCGGTTTACAACTTCTCACCGCAAACGCTGGGAGTGACCAGTCGACGGTGGATGATGGGGCCTCGTCGGAGGCTGAAGATAAGCGTGCCAAGATGACTGAGCTGGCACGACTGAAAGAGGACCTTCGAAACATGAATGCAGAGAACCAAAAGCTGAAGGAGATGCTCAGCCATGTCAGCAGTAACTACGCGAACTTGCAAATGCATCTTGCAGCAGTACTGCAACAGCAACAGAACCAACGCACTGAGAGCACGGAACAAGAGGTTGTTCAAGGAAAATTAGCTGAGGAGAGAAAGCATGGAGTTGGCGGAGGAACGGTGCCTAGACAATTCCTGAGTTTAGTTCCAAGTGAAATAGATGATCAAGTATCTAATTCTTCTTCCGGTGAAAGGACTCGATCAACCACACCTCCCAGCAATAAAAATGATAAGGATAACAAAGAGACTGATGACAAGTTGAACCCTTCCAACCCTACGACGGATCCATCCACTAGTCCAGAAGCCGCTATGAGAAAAGCTCGTGTCTCAGTCCGTGCCCGATCAGAAGCACCCATGATCAGTGATGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATACTACAGATGCACTATGGCAGTTGGCTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGAACAATTTTGACAACAACGTACGAAGGGACCCATAACCATCCACTGCCACCAGCTGCTATGGCCATGGCATCGACCACTGTAGCTGCTACTAGCATGTTGTTGTCTGGGTCAATGTCCAGTGCTGATGGAAAAATGAACCCCAATTTGCTAACTGGAGCTATTCTTCCATGCTCTAACATGGCAACACTTTCAGCTTCAGCACCATTCCCCACAGTGACATTGGACCTCACACACAACCCAAATGCGTTGCAGCAGTACCAATTAAGACCTCAAACTCAAACCCCATTCCTCCCGTCACCGCCTCAGAACTTTATGTCTGGACCCACAACACCACAACTGCCGAAACTGATTGCACAAGTGCTCTATAATCAATCCAAATTCTCAGGCCTTCAACTTTCTCAGGATGTGGGGCCTAATAATTCCCAAGCTCCAACACCGTCCTTGTTGCAGCCAAGCCAACAGGTCTCACTCACTGACACCGTCAGTGCCATCACCGCGGATCCAAACTTCCCCGCAGCGCTCACGGCCGCCATCTCCTCCATTATCGGTGGTGCTAATCCAAACAACAACAACAACAGTAGCAATCCCAATGTCATAAATAGTGCTACAATTAATCAATAG | 1470 | 0.4884 | MFPALGFPVNLSPSDPNHRTVLAEVDFLSARNNSSPHTNDHGTPPKSYPHVNTGLQLLTANAGSDQSTVDDGASSEAEDKRAKMTELARLKEDLRNMNAENQKLKEMLSHVSSNYANLQMHLAAVLQQQQNQRTESTEQEVVQGKLAEERKHGVGGGTVPRQFLSLVPSEIDDQVSNSSSGERTRSTTPPSNKNDKDNKETDDKLNPSNPTTDPSTSPEAAMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILTTTYEGTHNHPLPPAAMAMASTTVAATSMLLSGSMSSADGKMNPNLLTGAILPCSNMATLSASAPFPTVTLDLTHNPNALQQYQLRPQTQTPFLPSPPQNFMSGPTTPQLPKLIAQVLYNQSKFSGLQLSQDVGPNNSQAPTPSLLQPSQQVSLTDTVSAITADPNFPAALTAAISSIIGGANPNNNNNSSNPNVINSATINQ* | 490 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g0090 | 489 | MobiDBLite | consensus disorder prediction | 31 | 71 | - | - | |
Gso17g0090 | 489 | ProSiteProfiles | WRKY domain profile. | 233 | 299 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso17g0090 | 489 | MobiDBLite | consensus disorder prediction | 169 | 188 | - | - | |
Gso17g0090 | 489 | MobiDBLite | consensus disorder prediction | 415 | 434 | - | - | |
Gso17g0090 | 489 | MobiDBLite | consensus disorder prediction | 470 | 489 | - | - | |
Gso17g0090 | 489 | Pfam | WRKY DNA -binding domain | 240 | 297 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso17g0090 | 489 | MobiDBLite | consensus disorder prediction | 147 | 235 | - | - | |
Gso17g0090 | 489 | MobiDBLite | consensus disorder prediction | 31 | 82 | - | - | |
Gso17g0090 | 489 | MobiDBLite | consensus disorder prediction | 189 | 206 | - | - | |
Gso17g0090 | 489 | SUPERFAMILY | WRKY DNA-binding domain | 231 | 299 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso17g0090 | 489 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 15 | 477 | IPR044810 | GO:0003700 | |
Gso17g0090 | 489 | Gene3D | WRKY domain | 223 | 300 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso17g0090 | 489 | Coils | Coil | 77 | 114 | - | - | |
Gso17g0090 | 489 | PANTHER | WRKY TRANSCRIPTION FACTOR 6 | 15 | 477 | - | - | |
Gso17g0090 | 489 | SMART | WRKY_cls | 238 | 298 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g0090 | Gso-Chr17 | 894160 | 897005 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g0090 | 17 | 469 | WRKY Transcription Factor Family | AT1G62300 | 53.333 | 3.47e-138 | 407 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso17g0090 | WRKY | 4.4e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g0090 | - | - | gmx:100784668 | 926.391 |