Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0090 ATGTTCCCTGCCTTAGGATTTCCGGTCAACCTTAGCCCCTCCGATCCCAACCATCGGACGGTCCTTGCTGAAGTTGACTTCCTCTCCGCTAGAAACAATTCATCACCTCACACTAACGATCATGGAACCCCTCCTAAGTCTTATCCCCATGTAAATACCGGTTTACAACTTCTCACCGCAAACGCTGGGAGTGACCAGTCGACGGTGGATGATGGGGCCTCGTCGGAGGCTGAAGATAAGCGTGCCAAGATGACTGAGCTGGCACGACTGAAAGAGGACCTTCGAAACATGAATGCAGAGAACCAAAAGCTGAAGGAGATGCTCAGCCATGTCAGCAGTAACTACGCGAACTTGCAAATGCATCTTGCAGCAGTACTGCAACAGCAACAGAACCAACGCACTGAGAGCACGGAACAAGAGGTTGTTCAAGGAAAATTAGCTGAGGAGAGAAAGCATGGAGTTGGCGGAGGAACGGTGCCTAGACAATTCCTGAGTTTAGTTCCAAGTGAAATAGATGATCAAGTATCTAATTCTTCTTCCGGTGAAAGGACTCGATCAACCACACCTCCCAGCAATAAAAATGATAAGGATAACAAAGAGACTGATGACAAGTTGAACCCTTCCAACCCTACGACGGATCCATCCACTAGTCCAGAAGCCGCTATGAGAAAAGCTCGTGTCTCAGTCCGTGCCCGATCAGAAGCACCCATGATCAGTGATGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATACTACAGATGCACTATGGCAGTTGGCTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGAACAATTTTGACAACAACGTACGAAGGGACCCATAACCATCCACTGCCACCAGCTGCTATGGCCATGGCATCGACCACTGTAGCTGCTACTAGCATGTTGTTGTCTGGGTCAATGTCCAGTGCTGATGGAAAAATGAACCCCAATTTGCTAACTGGAGCTATTCTTCCATGCTCTAACATGGCAACACTTTCAGCTTCAGCACCATTCCCCACAGTGACATTGGACCTCACACACAACCCAAATGCGTTGCAGCAGTACCAATTAAGACCTCAAACTCAAACCCCATTCCTCCCGTCACCGCCTCAGAACTTTATGTCTGGACCCACAACACCACAACTGCCGAAACTGATTGCACAAGTGCTCTATAATCAATCCAAATTCTCAGGCCTTCAACTTTCTCAGGATGTGGGGCCTAATAATTCCCAAGCTCCAACACCGTCCTTGTTGCAGCCAAGCCAACAGGTCTCACTCACTGACACCGTCAGTGCCATCACCGCGGATCCAAACTTCCCCGCAGCGCTCACGGCCGCCATCTCCTCCATTATCGGTGGTGCTAATCCAAACAACAACAACAACAGTAGCAATCCCAATGTCATAAATAGTGCTACAATTAATCAATAG 1470 0.4884 MFPALGFPVNLSPSDPNHRTVLAEVDFLSARNNSSPHTNDHGTPPKSYPHVNTGLQLLTANAGSDQSTVDDGASSEAEDKRAKMTELARLKEDLRNMNAENQKLKEMLSHVSSNYANLQMHLAAVLQQQQNQRTESTEQEVVQGKLAEERKHGVGGGTVPRQFLSLVPSEIDDQVSNSSSGERTRSTTPPSNKNDKDNKETDDKLNPSNPTTDPSTSPEAAMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILTTTYEGTHNHPLPPAAMAMASTTVAATSMLLSGSMSSADGKMNPNLLTGAILPCSNMATLSASAPFPTVTLDLTHNPNALQQYQLRPQTQTPFLPSPPQNFMSGPTTPQLPKLIAQVLYNQSKFSGLQLSQDVGPNNSQAPTPSLLQPSQQVSLTDTVSAITADPNFPAALTAAISSIIGGANPNNNNNSSNPNVINSATINQ* 490
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0090 489 MobiDBLite consensus disorder prediction 31 71 - -
Gso17g0090 489 ProSiteProfiles WRKY domain profile. 233 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g0090 489 MobiDBLite consensus disorder prediction 169 188 - -
Gso17g0090 489 MobiDBLite consensus disorder prediction 415 434 - -
Gso17g0090 489 MobiDBLite consensus disorder prediction 470 489 - -
Gso17g0090 489 Pfam WRKY DNA -binding domain 240 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g0090 489 MobiDBLite consensus disorder prediction 147 235 - -
Gso17g0090 489 MobiDBLite consensus disorder prediction 31 82 - -
Gso17g0090 489 MobiDBLite consensus disorder prediction 189 206 - -
Gso17g0090 489 SUPERFAMILY WRKY DNA-binding domain 231 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g0090 489 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 477 IPR044810 GO:0003700
Gso17g0090 489 Gene3D WRKY domain 223 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g0090 489 Coils Coil 77 114 - -
Gso17g0090 489 PANTHER WRKY TRANSCRIPTION FACTOR 6 15 477 - -
Gso17g0090 489 SMART WRKY_cls 238 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso17g0090 Gso-Chr17 894160 897005 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0090 17 469 WRKY Transcription Factor Family AT1G62300 53.333 3.47e-138 407
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso17g0090 WRKY 4.4e-24 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0090 - - gmx:100784668 926.391