Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0087 ATGGAAATATCTTTTCCTTGGATTCTGGTGGTCACAGTGGTCATGGCAATGCCACTTTCATTTCGCATAAAAGCAAACCAACTTTCATACGACTACTACAAGTTTTCATGCCCAAACTTGGAAAGCGTAATCAAGAGTGAGTTGCTAGGCATATTCTTGACAGATGCTACTGCACCAGCTGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTGCAAGGATGTGATGCCTCAATTCTGTTGGATTCCAACTACCTAGCTCACAGTCACAGCTCTGAAATGAAATCTTCAAGGAACTTTGGTATCAGAAAGCGGGAAACGATCAGCTACATTAAGTCAATATTAGAAGAAGAATGTCCGGGCCAGGTTTCTTGTGCAGATATTATTGTATTAGCTGCTAAGGAATCAGTGTCATTCTCTGGAGGACCTCATATTGAGATCCCACTTGGAAGAAAAGATTCCAGAACTTGTAGTTTCCATGAGGCTGATGCTAAGCTTCCTTCACCAACAATAACGGTTGATGAATTTATATCGATTTTCATGTCTAAAGGAATGAACATTGAAGAGTCTGTATCCATTTTAGGTGCACATACACTAGGGATTGGACACTGCTTCAACATTGTTGGTAGATTGTATGATCCACAGCTAGGAGACAAGATGGATTTTGGGTTTGAAGCCTCTCTAAGACTAGCATGCCCAACTGAGATTCCTTTGACAAACTTCACATTTGTGCCTAATGACATGACCCCAGTTATATTTGACAACCAGTATTACCGAGACATTATGATGGGGAGAGGCTTGTTTGGTATTGACTCCAGCATTTCTAGAGATCCTCGAACAGCACCCTTTGTCATGCGGTTTGCTATGGATCAGAACTACTTCTTCAAGGCTTTCTCATCTGCATTTCTTAAACTTTCTTCTACCAATGTTCTCACAGATGTGCAGGGTGATGTCCGAAGGCAATGCAACCAGGTAAACTAA 981 0.4159 MEISFPWILVVTVVMAMPLSFRIKANQLSYDYYKFSCPNLESVIKSELLGIFLTDATAPAAFLRLMFHDCQVQGCDASILLDSNYLAHSHSSEMKSSRNFGIRKRETISYIKSILEEECPGQVSCADIIVLAAKESVSFSGGPHIEIPLGRKDSRTCSFHEADAKLPSPTITVDEFISIFMSKGMNIEESVSILGAHTLGIGHCFNIVGRLYDPQLGDKMDFGFEASLRLACPTEIPLTNFTFVPNDMTPVIFDNQYYRDIMMGRGLFGIDSSISRDPRTAPFVMRFAMDQNYFFKAFSSAFLKLSSTNVLTDVQGDVRRQCNQVN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0087 326 Gene3D - 31 326 - -
Gso17g0087 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 Pfam Peroxidase 51 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PANTHER PEROXIDASE 25-RELATED 21 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 ProSiteProfiles Plant heme peroxidase family profile. 27 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 PANTHER PEROXIDASE 21 324 - -
Gso17g0087 326 Gene3D Peroxidase, domain 2 167 305 - -
Gso17g0087 326 SUPERFAMILY Heme-dependent peroxidases 27 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g0087 326 CDD secretory_peroxidase 27 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0087 Gso-Chr17 874461 876088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0087 74 326 Peroxidase AT3G17070 52.326 1.16e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0087 K00430 - gmx:100806951 656.366