Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0083 ATGTCGTTCTTGGTTGTTGCTATAACTTGCTCTCAAGAAGAGCAATCAATATACTTGGCTGCAAGACTAAGAAGTAGCCTAGGAGTTAAGTTGGTAGAGAAAGACAGAGGAGCGAAGATGACGACAACATACACACCTGAGTTTCTAAGTTTACGAAAAGGAATATGGGCGCAAGAAGGAGGAGACAGAAACGCAGGTGATGAAGTTGTCATTGGTTTTGTGGACAGTGGCATCAACGCACTTCATCCCAGCTTTGCTTACGATCCCATGCACCCTTTCTCATCAAATCTCTCACATTTTGAGGGTGCCACCTGTGAGACGGGTCCTCTCTTCCCACCTAGTTCTTGCAATGGAAAGATAGTAGCAGCCAAGTACTTCTCTGCTGGGGCTGAAGCTACTGTTACCCTAAATGCTTCCAAGGATTTTCTTTCACCCTTTGATGCAGATGGACATGGCAGTCATGTCGCATCTGTTGCTGCTGGAAATGCTGGTGTTCCTGTTGTGGTGAACGGTTTTTTCTATGGAAACGCTAGCGGAATGGCGCCACGTGCAAGGATTGCTGTTTATAAGGCTATCTTTCCCTCCGTGGGAACTCTAGCAGATGTTATTGCAGCTATCGATCAAGCTGTTCTGGATGGGGTGGATATCTTATCACTCTCTGTTGGACCAAATGAACCACCAGAAAACAACGTGACCTTCTTGAGCATGTTTGATATTCTGTTATTTGCACGAAAAGCGGGAGTTTTTGTGGTGCAAGCTGCAGGGAACAAGGGTCCAGCATCTTCAAGTGTAGTGTCATTCGGTCCCTGGAGTGTTGGTGTTGCCGCTTGCACCACAGACAGAAGGTACCCTGCTTCACTTCTTGGAAATGGCTCATTACTTAATGGCGCAGGACTCTCAGGACCAACTTTTGGAAATGGATGTGTTTTGCATAAGTTTGTTTTAGCTAAGGATGCAGTAAAAACAAATGAAGCAACTCTGGAGTACATAGAGGAGTGCCAACATCCAGAAGTCTTGGGCCCTAATATAGTGATGGGAAATATCATTATCTGCACCTTTTCAGCGGGCTTCAATAATGGAACCTCAACTCTTGATGCTATTATTGGAACCTCGAAGGCTCTAGGGTTGGAGGGCTTTATCTTAGTTGCAAACCCAAACTATGGAGATTATATTGCAGAGCCAATCCCTTTTGATGTTTCTGGTATTCTGATTCCCCGTGTAGATGATGCCAAGGTAATATTACAGTATTATGAAGAGCAAACAAAGAGGGATATGAAAGGAACTGCCACAGAGTTTGGTGCTATGGCAGCTGTGGGAGAAGGAAGAGTTGCCTCTTTCACCGGGAGATCACCTGTAGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACATGCACAATAATCTTGCAGATGTACTTAAACCTGATATTCTTGCTCCAGGGCATCAAATATGGGCAGCATGGACCCCCATCAGTGCCTTAGAACCTATGATCAAAGGGCATGATTTTGCATTATTGTCTGGTACCAGCATGTCCACACCTCATTTGGCTGGAATAGCAGCACTTATAAAGCAATACAATCCATTATGGACTCCATCTATGATAGCATCTGCAATCTCCACAACAAGCTCAAAGTATGATAATCTTGGAGAGCATATGATGGCTGAAGGCTTTGAGGCCAGCAGCTTGCTTCCCTCCACTCCTTTTGAATATGGGGCAGGCTTGGTGAGCCCCAATTGTGCCATTGATCCCGGTTTGGTACTATCATCAGAACATGAAGACTTCATCAGCTTCTTGTGCTCTTTGCCAAACATGGACACGGATGCAATAATTGCAGCTACTGGTGACCAATGCAATCACCCTTATGCCTATCCATTCAGTCTAAACCTTCCTTCAGTAACAATATCTGCACTAAGAGGATCAGTTTCTGTGTGGAGAACTTTAATGAGTGTGGGGAACAACACAGAGACATACTTGGCCTCTGTTCAACCTCCAAAGGGAACAAAAGCCTACCTGTATCCAACTTGGTTTACCATAAGTCCACAAGGAACACAGGATTTGGAAATTCAACTCAGTGTCATCCAACCAATGTCGAATTTTACCTTTGGTGAAATTGTTTTAACAGGAAATTTGAACCACATTGTACGAATAACGTTGTCAGTTTTAGCAATTTCGGTGTAA 2184 0.4414 MSFLVVAITCSQEEQSIYLAARLRSSLGVKLVEKDRGAKMTTTYTPEFLSLRKGIWAQEGGDRNAGDEVVIGFVDSGINALHPSFAYDPMHPFSSNLSHFEGATCETGPLFPPSSCNGKIVAAKYFSAGAEATVTLNASKDFLSPFDADGHGSHVASVAAGNAGVPVVVNGFFYGNASGMAPRARIAVYKAIFPSVGTLADVIAAIDQAVLDGVDILSLSVGPNEPPENNVTFLSMFDILLFARKAGVFVVQAAGNKGPASSSVVSFGPWSVGVAACTTDRRYPASLLGNGSLLNGAGLSGPTFGNGCVLHKFVLAKDAVKTNEATLEYIEECQHPEVLGPNIVMGNIIICTFSAGFNNGTSTLDAIIGTSKALGLEGFILVANPNYGDYIAEPIPFDVSGILIPRVDDAKVILQYYEEQTKRDMKGTATEFGAMAAVGEGRVASFTGRSPVVSRFSSRGPDIIDMHNNLADVLKPDILAPGHQIWAAWTPISALEPMIKGHDFALLSGTSMSTPHLAGIAALIKQYNPLWTPSMIASAISTTSSKYDNLGEHMMAEGFEASSLLPSTPFEYGAGLVSPNCAIDPGLVLSSEHEDFISFLCSLPNMDTDAIIAATGDQCNHPYAYPFSLNLPSVTISALRGSVSVWRTLMSVGNNTETYLASVQPPKGTKAYLYPTWFTISPQGTQDLEIQLSVIQPMSNFTFGEIVLTGNLNHIVRITLSVLAISV* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0083 727 PRINTS Subtilisin serine protease family (S8) signature 66 85 IPR015500 -
Gso17g0083 727 PRINTS Subtilisin serine protease family (S8) signature 508 524 IPR015500 -
Gso17g0083 727 PRINTS Subtilisin serine protease family (S8) signature 147 160 IPR015500 -
Gso17g0083 727 Pfam Fibronectin type-III domain 629 722 IPR041469 -
Gso17g0083 727 Gene3D - 280 444 - -
Gso17g0083 727 ProSitePatterns Serine proteases, subtilase family, histidine active site. 151 161 IPR022398 -
Gso17g0083 727 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 71 82 IPR023827 -
Gso17g0083 727 Gene3D - 600 724 - -
Gso17g0083 727 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 718 IPR045051 -
Gso17g0083 727 CDD PA_subtilisin_like 288 417 - -
Gso17g0083 727 ProSiteProfiles Serine proteases, subtilase domain profile. 46 583 - -
Gso17g0083 727 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 21 718 - -
Gso17g0083 727 Gene3D Peptidase S8/S53 domain 69 596 IPR036852 GO:0004252|GO:0006508
Gso17g0083 727 CDD Peptidases_S8_3 39 545 IPR034197 -
Gso17g0083 727 Pfam Subtilase family 66 547 IPR000209 GO:0006508|GO:0008236
Gso17g0083 727 SUPERFAMILY Subtilisin-like 40 587 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0083 Gso-Chr17 825583 829994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0083 20 725 Subtilisin-like Serine Gene Family AT1G62340 61.367 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0083 - - gsj:114393456 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2235 7 45980764 45985933 Gso17g0083 17 825583 829994 GST