Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0082 ATGAACAACTCAAAGCAACAGAAGCAGCTCCAACAAAGAGGATGCAAGACCTTCTGTTGCAGTTGCAGGTTCAGTGTTTCTTCCACTGAGGAAGCAGAAAGCTCATCAGCCTCCGATAGGTTCCCTTCTGTTTCAAGCCTTGCACATGCCATGGTGCAAGAGAGGCTTGACCAAATGATTAGAGCTAGGCATGTAGAGAGAAGAAGGCAGCACGACAGAGAAGGGACCAAGTTTGTTGTAATGGTAGCAATGGAGAAGAGCTCTTATGATCCAAGAGAGGATTTTAGGGAGTCCATGATGGAGATGATTACTGCCAAGCACCTTCAAGACGCCAAAGATCTTCGTAGTCTATTGAACTATTATATCTCCATGAACTCTGATGAGTACCATAGTCTTATCCTTGAGGTTTTTCATGAGGTTTGTACTAGTTTGTTCTTATCATGTAAATGCTATTGCTAA 459 0.4314 MNNSKQQKQLQQRGCKTFCCSCRFSVSSTEEAESSSASDRFPSVSSLAHAMVQERLDQMIRARHVERRRQHDREGTKFVVMVAMEKSSYDPREDFRESMMEMITAKHLQDAKDLRSLLNYYISMNSDEYHSLILEVFHEVCTSLFLSCKCYC* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0082 152 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 82 145 IPR006458 -
Gso17g0082 152 Pfam Transcriptional repressor, ovate 88 145 IPR006458 -
Gso17g0082 152 ProSiteProfiles OVATE domain profile. 84 143 IPR006458 -
Gso17g0082 152 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 146 IPR038933 GO:0045892
Gso17g0082 152 PANTHER TRANSCRIPTION REPRESSOR-RELATED 11 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0082 Gso-Chr17 794251 795038 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso17g0082 Ovate 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0082 - - gmx:112999988 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2239 7 46027131 46027924 Gso17g0082 17 794251 795038 GST