Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0055 ATGGCAGTCCTATCTTCCTTGGCAGTCATCACCTTCTTCCTTTCACTCTTGGTGCTTTTTCTTGCAAAGAACTACAAGCAAAAGAGTCTCCATAAACTGCCACCAGGGCCATGGAAGCTACCTATTATAGGGAACCTGCTTCAACTAGCAGCAGCAAGTTCACTTCCTCATCATGCTATCAGAGAATTAGCTAAAAAATATGGACCCTTGATGCACTTGCAACTAGGTGAGATTTCTGCAGTGATTGTATCATCTCCCAACATGGCCAAGGAAATAATGAAAACACATGATCTTGCTTTTGCACAGAGGCCAAAATTTCTTGCTTCTGATATCATGGGCTATGGATCAGTTGACATTGCCTTCGCTCCATATGGAGATTATTGGAGACAAATGAGGAAAATATGTACGTTGGAGCTACTAAGTGCAAAGAAGGTTCAGTCTTTCTCCAATATTAGAGAACAGGAGATAGCTAAGCTCATTGAAAAAATTCAGTCATCTGCAGGTGCACCAATCAATCTCACCAGCATGATTAACTCTTTCATAAGTACCTTTGTTTCTAGAACAGCATTCGGTAACATAACTGACGACCATGAAGAATTTTTATTGATCACAAGGGAAGCAATAGAAGTGGCAGATGGCTTTGATCTTGCAGATATGTTTCCTTCTTTCAAACCTATGCATCTCATAACCGGGTTGAAAGCCAAAATGGATAAGATGCATAAGAAGGTTGACAAGATCTTAGACAAGATCATAAAGGAGAATCAAGCAAATAAAGGCATGGGAGAAGAAAAGAACGAAAATCTTGTTGAGGTTCTTTTAAGAGTCCAACACAGTGGCAACCTTGATACCCCAATTACAACCAACAACATCAAAGCTGTGATTTGGGACATATTTGCTGCTGGAACGGATACATCAGCAAAAGTAATAGATTGGGCAATGTCAGAAATGATGAGAAACCCAAGAGTAAGGGAGAAGGCACAAGCTGAGATGAGAGGAAAGGAAACAATCCGTGAGAGCAACCTAGGAGAACTTAGCTACCTCAAGGCAGTAATAAAAGAAACCATGAGGTTACACCCACCTCTTCCTTTGTTGCTTCCAAGAGAATGCATAGAAGCATGCAGGATTGATGGATATGATTTACCCACCAAGACCAAAGTCATAGTGAACGCATGGGCAATTGGAAGAGATCCTGAGAACTGGCATGATGCAGACAGCTTTATACCAGAAAGATTCCACGGTGCATCTATTGATTTCAAAGGAATAGACTTTGAGTACATCCCTTTTGGGGCAGGAAGGAGAATGTGCCCGGGCATTTCATTTGGTATAGCCAATGTGGAGTTTGCTCTAGCCAAATTACTCTATCACTTCAATTGGGAACTCCAACAAGGAACGAAACCAGAGGAGTTTGACATGGATGAATCATTTGGAGCTGTGGTTGGAAGGAAAAACAACCTTCACTTGATTCCCATTCCTTATGATCCTTCAATCCATGATAATGGCAAAGGAGGCACCTTCATTTAA 1521 0.4129 MAVLSSLAVITFFLSLLVLFLAKNYKQKSLHKLPPGPWKLPIIGNLLQLAAASSLPHHAIRELAKKYGPLMHLQLGEISAVIVSSPNMAKEIMKTHDLAFAQRPKFLASDIMGYGSVDIAFAPYGDYWRQMRKICTLELLSAKKVQSFSNIREQEIAKLIEKIQSSAGAPINLTSMINSFISTFVSRTAFGNITDDHEEFLLITREAIEVADGFDLADMFPSFKPMHLITGLKAKMDKMHKKVDKILDKIIKENQANKGMGEEKNENLVEVLLRVQHSGNLDTPITTNNIKAVIWDIFAAGTDTSAKVIDWAMSEMMRNPRVREKAQAEMRGKETIRESNLGELSYLKAVIKETMRLHPPLPLLLPRECIEACRIDGYDLPTKTKVIVNAWAIGRDPENWHDADSFIPERFHGASIDFKGIDFEYIPFGAGRRMCPGISFGIANVEFALAKLLYHFNWELQQGTKPEEFDMDESFGAVVGRKNNLHLIPIPYDPSIHDNGKGGTFI* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0055 506 PANTHER CYTOCHROME P450 71D8 2 494 - -
Gso17g0055 506 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Gso17g0055 506 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 PANTHER OS08G0105600 PROTEIN 2 494 - -
Gso17g0055 506 Gene3D Cytochrome P450 26 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g0055 506 SUPERFAMILY Cytochrome P450 34 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0055 Gso-Chr17 610310 612229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0055 4 494 Cytochrome P450 AT3G26300 41.420 8.29e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0055 - K15472 gmx:100800554 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2264 7 46248618 46250584 Gso17g0055 17 610310 612229 GST