Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0039 ATGGACATGGACGGGCATAGAAGCAGCGGCACCGGCACCGGCGTGTGTGAGATAGAAGAAGTGGACGAGAATTCGAACGAGAGGCAACTCCATGATGATGATGATGATGATGAAGAAGAGTACTGTGTTTATGTAGCAGTGGGTAAGAGCGACACAAGCATGGACGCTCTCTCATGGGCTCTCAACAACTTTGTTGCTCAATCACCATCTACCATCATTTATCTCATTCATGTTTTCCCTCAGATCAACCACATTCCAAATCCATTGGGAATAGGAATGATTCCAAGGAATCAAGTGAGTGCTGAGCAGGTGGAGAGTTATATTGACCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAATTCCTACAATCATGCTCTACTTCCAAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACTCAGTTGCAAAGGCTATCCTCGACCTGATTCCCATTCTTCAAATAAAAAGGCTAGTGATTGGAGCCAACAAACTTCATCTAAGAAAATCAAAATCAAGGAGAGGGAAAGGCATAGCCGATCAGATACTGCAGAATGCACCACAAAGTTGCAAGGTGAGAATTATATGTGAAAAGAAGGAAGTAAATGAGCAGATGATGTCATTGTCACCCTTCCCACAGCCGCTTGCCACTTGCACCTCTGCTAATGATGCTTCTATAACCAGTAAAAAAGAAGATCATCAAAACGATTTGGTTTCATGTATTTGTTTCATACCCAAGTTTAAATGA 750 0.4307 MDMDGHRSSGTGTGVCEIEEVDENSNERQLHDDDDDDEEEYCVYVAVGKSDTSMDALSWALNNFVAQSPSTIIYLIHVFPQINHIPNPLGIGMIPRNQVSAEQVESYIDQERGKRRELLQKFLQSCSTSKVKVDTILIESDSVAKAILDLIPILQIKRLVIGANKLHLRKSKSRRGKGIADQILQNAPQSCKVRIICEKKEVNEQMMSLSPFPQPLATCTSANDASITSKKEDHQNDLVSCICFIPKFK* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0039 249 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 5 248 - -
Gso17g0039 249 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 168 - -
Gso17g0039 249 CDD STK_N 43 198 - -
Gso17g0039 249 Gene3D HUPs 37 208 IPR014729 -
Gso17g0039 249 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 248 - -
Gso17g0039 249 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0039 Gso-Chr17 468945 470627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0039 42 200 U-box Gene Family AT4G25160 28.931 5.56e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0039 - - gmx:100527773 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0039 17 468945 470627 Gso15g1021 15 9582465 9584589 PCT
Gso17g0039 17 468945 470627 Gso9g0131 9 1139252 1140801 PCT