Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0026 ATGGCAAGCGCAAGTGTTGGTAAAGAACTGACGCTGTATTCGTATTGGAGGAGCTCTTGTTCCCACCGAGTCCGAATCGCTCTCAACCTCAAAGGGCTTAAATACGAATACAAGCCCGTCAATCTGCTCAAGGGAGAACAATCTCGCCCTGAGTTTCTCCAGCTCAATCCTGTTGGTTGTGTCCCCGTTCTAGTGGATGACCACGTTGTTCTCTATGACTCTTTCGCCATTATTATGTATTTGGAAGATAAGTATCCTCACAATCCTTTGCTCCCTCATGATATTTATAAGAGAGCAATCAATTTCCAGGCTGCTAGTGTTGTTTCCTCAACAATACAACCTCTTCATAACTTGAGTTTACTGAACTACATTGGGGAGAAAGTTGGCCCTGATGAAAAACTTCCTTGGGCCCAAAGTATAATTAGAAGAGGCTTTAAAGCACTGGAAAAGCTATTGAAAGACCACACAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCAGATATATTTTTAGCACCTCAGTTACATGCAGCATTTAAGAGATTCAACATTCACATGAACGAGTTCCCTATTCTAGCAAGATTGCATGAGACATATAATGAGATCCCTGCATTCCAGGAGGCTCTGCCAGAGAACCAGCCTGATGCAGTACACTAG 660 0.4318 MASASVGKELTLYSYWRSSCSHRVRIALNLKGLKYEYKPVNLLKGEQSRPEFLQLNPVGCVPVLVDDHVVLYDSFAIIMYLEDKYPHNPLLPHDIYKRAINFQAASVVSSTIQPLHNLSLLNYIGEKVGPDEKLPWAQSIIRRGFKALEKLLKDHTGRYATGDEVFLADIFLAPQLHAAFKRFNIHMNEFPILARLHETYNEIPAFQEALPENQPDAVH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0026 219 SUPERFAMILY GST C-terminal domain-like 89 217 IPR036282 -
Gso17g0026 219 CDD GST_N_Zeta 10 82 IPR034333 -
Gso17g0026 219 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 4 219 - -
Gso17g0026 219 SFLD Main (cytGST) 10 199 - -
Gso17g0026 219 SUPERFAMILY Thioredoxin-like 10 92 IPR036249 -
Gso17g0026 219 PANTHER MALEYLACETOACETATE ISOMERASE 4 219 - -
Gso17g0026 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Gso17g0026 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Gso17g0026 219 Pfam Glutathione S-transferase, N-terminal domain 12 89 IPR004045 -
Gso17g0026 219 Gene3D Glutaredoxin 8 92 - -
Gso17g0026 219 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Gso17g0026 219 Pfam Glutathione S-transferase, C-terminal domain 137 182 - -
Gso17g0026 219 Gene3D - 93 219 - -
Gso17g0026 219 CDD GST_C_Zeta 96 214 IPR034330 -
Gso17g0026 219 SFLD Glutathione Transferase (cytosolic) 10 199 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0026 Gso-Chr17 355947 360273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0026 9 217 Glutathione S-transferase Gene Family AT2G02380 63.636 1.38e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0026 K01800 - gmx:547590 447.973