Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1765 ATGGAACTTAAAGCCCAAAACATTCCCCCCTTTGAAATTTCCCATCCTCGACACCGTCCCAGAAGCAGCGTCCAATTTGATGATACTGCCCTCTTTCATGATGACAATGCCAGCCTCATCTATGTTAATGATCCCATCAAGACAAATGAAAATTTTGAGTTTGCCGGGAATGAGATCCGGACCAGCAGATACACTCTTCTCACCTTCTTGCCCAAGAATATTTTCATTCAATTTCACAGGGTTGCTTATGTTTATTTCCTTGCCATTGCCGCTCTCAATCAGCTTCCTCCGCTCGCTGTTTTTGGGCGAACTGTCTCCCTTTTCCCCCTCTTGTTTGTGCTTTGCGTCACAGCTATCAAGGATGCCTATGAGGATTGGCGCAGGCACAGGTCCGATCTCAATGAAAACAATCGAGAGTGTCTGGTTCTTCAATCGGCTCAGTTCTGCCCCAAGAAATGGAAAAATATACAGGCTGGTGATGTCATTAAAATCTCTGCTGATGAGATGATTCCTGCTGACATGGTCTTGTTGGGGACGAGTGATCCAAGTGGGATTGCCTATATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAAACAAGGTATGCTAAGCAGGAAACTGCTTCAGCCGTGTTGCCAGATGCTTGTGCTGTTTCTGGAGTTATTAGATGTGAGCCACCTAATCGGAATATTTATGAGTTCACTGCCAACATGGAATTCAATGGTTGCAAATTTCCCCTTAACCAGTCAAACATTGTGCTGCGTGGTTGCATGCTGAAGAACACAAATTGGATAGTTGGTGTGGTGGTTTATGCAGGACAGCAAACAAAAGCGATGTTGAACAGTGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGCTACATGAACAGAGAAACTTTTTGGCTGTCGGTTTTTCTTTTTATCATGTGCGCAGTTGTTGCCCTTGGGATGGGTCTCTGGCTGGTACGCCACAAGGATCAGCTTGATACCTTGCCTTACTACAGAAAAACATACTTCAATGGACCGGATAATGGAAAGAAATACAGGTATTATGGGATTCCAATGGAGACATTCTTCTCCTTTTTGAGTTCTATTATAGTTTTTCAGATAATGATACCAATATCTCTATACATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATAGAGGACGGGGATATGTATGATGCTAACTCTGGATCAAGGTTCCAGTGTAGGTCATTAAATATAAATGAAGATTTGGGTCAAATACGCTACGTGTTTTCAGACAAGACAGGAACACTGACAGAAAACAAAATGGAGTTTCAGAGAGCTAGTGTACATGGAAAGAAATATGGGAGCTCCTTGCTTACGGCTGATAATAATACAGCAGCCAATAGTGGTAAACGAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAACTAATGGCATTGTTGCAGAAAGACTCAGATAGGGATGAAAGAATTGCTGCTCATGAGTTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATTATTAGTAGCAGTACATCTTCTAGTTGTGGAAAAGGAGAATCAAATGAACCCAGAGAAAGTATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCTGCCTCTGTATATGGATATACTCTATTTGAGCGAACATCTGGAAACATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGCACGAAAGAGGATGTCTGTTGTTATCCGGTTTCCGGATAATGTTGTTAAGGTGTTGGTTAAAGGTGCTGACACTTCAATGTTTAACATTTTAGCACCTGACAATTCAGGCAACAATGGCATACGGCATGAAACTCAGAGTCATTTAAGGGAATATTCTATGCAAGGTTTACGAACTCTTGTTGTTGCCTCCAGGGATCTTTCAGATGCTGAACTTGAGGAGTGGCAAAGCATGTATGAAGATGCGAGCACTTCATTGACAGATCGAGCAGCAAAACTACGTCAAACAGCGGCTCTTATAGAATGCAACCTAAAGCTTCTTGGAGCAACTGGAATTGAAGACAAGCTACAGGAGGGTGTACCAGAAGCCATTGAATCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACCGGTGATAAGCAAGAGACTGCAATTTCAATTGGTCTTTCTTGTAAACTTCTGAGTGCAGATATGCAGCAAATAATTATAAATGGCACTTCAGAGGTTGAGTGCAGAAATCTCTTGGCTGATGCCAAAACAAAGTATGGTGTGAAATCTTCAAGTAGAGAACAACAGAATCTAAAATGCAAAATTGATTCTAGACATGGAGGCCCTGATATTCCCAATGATACAAAATCCTTGAGCATGCCCAAGTGGAATCCAGGAAAGGAAGAAAAAACTACTGCTCCATTGGCACTCATAATTGATGGAACCAGTTTGGTTTATATTTTAGAGAAGGAATTACAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATCGTTGATCTGATAAAAAGCCGCACAGATGATCTGACATTAGCTATAGGTGATGGGGCAAATGATGTTTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAATTCCAGTTCTTGAATAAATTACTTCTAGTTCATGGACACTGGAATTACCAGCGTGTTGGTTATTTAATTCTGTACAACTTCTACCGAAATGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTAACAGATTGGAGTAGTGTATTTTATTCTGTGATATACACATCTATCCCTACTATCGTTGTTGGTGTTCTGGACAAAGACTTGAGTCACAAGACACTCTTGCAGTATCCAAAATTGTATGGTGCAGGTCACCGGCACGAGGCTTACAATATGCAGTTATTTTGGTTCACAATGATTGACACACTATGGCAGAGTCTTGTTCTCTTCTACATTCCTGTATTCATCTATAAGGACAGCACAATTGATATATGGAGCATGGGCAGTTTATGGACAATTTCAGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATTAACCAATGGGCACTAGTTAGTCATGTTGCTGTTTGGGGATCTATAATCATTACATATGGTTGCATGGTGATATTGGATTCTATACCTGTCTTTCCGAATTACGGGACTATTTATCATTTGGCAAGGTCCCCTACATATTGGATGACAATTTTGCTTATAATAATTGTGGCATTGCTACCTCGGTTTCTTTGCAAAGCTGTTTATCAAATCTTTTGTCCTTCGGATATCCAGATAGCTAGAGTAGCTGATACCATGAGAAAACAGCATGGTGATTTGCAATCAAGGCTACCAGTTTCCAATTAA 3519 0.4138 MELKAQNIPPFEISHPRHRPRSSVQFDDTALFHDDNASLIYVNDPIKTNENFEFAGNEIRTSRYTLLTFLPKNIFIQFHRVAYVYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDLNENNRECLVLQSAQFCPKKWKNIQAGDVIKISADEMIPADMVLLGTSDPSGIAYIQTMNLDGESNLKTRYAKQETASAVLPDACAVSGVIRCEPPNRNIYEFTANMEFNGCKFPLNQSNIVLRGCMLKNTNWIVGVVVYAGQQTKAMLNSAASPSKRSKLESYMNRETFWLSVFLFIMCAVVALGMGLWLVRHKDQLDTLPYYRKTYFNGPDNGKKYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKKYGSSLLTADNNTAANSGKRRWKLKSEIAVDSELMALLQKDSDRDERIAAHEFFLTLAACNTVIPIISSSTSSSCGKGESNEPRESIDYQGESPDEQALVSAASVYGYTLFERTSGNIVIDVNGEKLRLDVLGLHEFDSARKRMSVVIRFPDNVVKVLVKGADTSMFNILAPDNSGNNGIRHETQSHLREYSMQGLRTLVVASRDLSDAELEEWQSMYEDASTSLTDRAAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIIINGTSEVECRNLLADAKTKYGVKSSSREQQNLKCKIDSRHGGPDIPNDTKSLSMPKWNPGKEEKTTAPLALIIDGTSLVYILEKELQSELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLNKLLLVHGHWNYQRVGYLILYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIVVGVLDKDLSHKTLLQYPKLYGAGHRHEAYNMQLFWFTMIDTLWQSLVLFYIPVFIYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWALVSHVAVWGSIIITYGCMVILDSIPVFPNYGTIYHLARSPTYWMTILLIIIVALLPRFLCKAVYQIFCPSDIQIARVADTMRKQHGDLQSRLPVSN* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1765 1172 Gene3D - 436 471 IPR023299 GO:0000166
Gso16g1765 1172 Gene3D - 690 918 IPR023214 -
Gso16g1765 1172 Pfam haloacid dehalogenase-like hydrolase 422 736 - -
Gso16g1765 1172 MobiDBLite consensus disorder prediction 1 21 - -
Gso16g1765 1172 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 1167 - -
Gso16g1765 1172 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1145 IPR023298 -
Gso16g1765 1172 MobiDBLite consensus disorder prediction 518 541 - -
Gso16g1765 1172 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Gso16g1765 1172 SFLD Haloacid Dehalogenase 410 929 - -
Gso16g1765 1172 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Gso16g1765 1172 PRINTS P-type cation-transporting ATPase superfamily signature 878 897 - -
Gso16g1765 1172 Pfam E1-E2 ATPase 139 384 - -
Gso16g1765 1172 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 707 IPR023299 GO:0000166
Gso16g1765 1172 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 54 1152 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso16g1765 1172 Gene3D - 538 670 IPR023299 GO:0000166
Gso16g1765 1172 SUPERFAMILY HAD-like 413 922 IPR036412 -
Gso16g1765 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 359 452 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso16g1765 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 689 742 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso16g1765 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 964 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso16g1765 1172 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Gso16g1765 1172 SFLD p-type atpase 410 929 IPR044492 -
Gso16g1765 1172 MobiDBLite consensus disorder prediction 786 811 - -
Gso16g1765 1172 Gene3D - 113 283 - -
Gso16g1765 1172 Gene3D - 410 422 - -
Gso16g1765 1172 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 36 1167 - -
Gso16g1765 1172 CDD P-type_ATPase_APLT_Dnf-like 56 1038 - -
Gso16g1765 1172 Pfam Phospholipid-translocating P-type ATPase C-terminal 906 1146 IPR032630 -
Gso16g1765 1172 Gene3D - 423 435 IPR023214 -
Gso16g1765 1172 SUPERFAMILY Calcium ATPase, transduction domain A 137 279 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1765 Gso-Chr16 38248112 38256156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1765 34 1170 Primary Pumps ATPases AT5G04930 56.053 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1765 K14802 - gmx:100788740 2320.04