Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1763 ATGGATGATAGAAAGGTATTGGAGGAGCTTGTGAAAGGGCGTGAGTTTGCTAATCAACTTCGACAAGTGATGATTAATGGAAAAGATAATGATTCACCATTTGTTCGAAGTCTTGCCAAGAACGTGCTCAGATCCTTCACCAACACGCTCTTCCTCTTGGACAAGTATCCCTCTTACGAGGTTTCTCCCAGTACTAAATCTGAGGACTCTCAAGAAAGTTGCAAGAGTTTTAACAGTAAGAACAAAAGAGGCTGCTACAAGAGAAAAAGAAATACACAAGAACGGGAGGAGGTGTCTCAAACTCCAAAACTGGATGGCCACCAATGGAGAAAGTATGGCCAAAAAGAGATCCTCAATGCTAAGTACTCAAGGAACTACTACAGGTGCACTCACAAGTATGATCAGAATTGTCAAGCAATAAAACAAGTGCAAAGAATTCAAGAGGATCCTCCCTTGTACAAGACCACCTATTTGGGCCACCACACATGCAATGACTTTCTAAACTCTGCAATCATACTTGATTCCAATAATGATCCTTCGGACACTTCCATATTGCTAAGCTTTAACAACACCTTCCCTACTCCAACCAAACAAGAGTGCCCCTTTTTATCATCTTTTCCCTCACCATCATCAGGGAAAAAAGAGGAGGTGATTCCCTCTTCTTCCCCACCAGAAACCTCCTTAGATGATTCTTCAAGGCATAATAATGTCACTCTACCACCACCTGATTTCTGGGATGTTATGTTTGATTCTGTTGACCTTGATGATGTCAACCTTTTGTTGGATTGTGATGACTAA 798 0.4148 MDDRKVLEELVKGREFANQLRQVMINGKDNDSPFVRSLAKNVLRSFTNTLFLLDKYPSYEVSPSTKSEDSQESCKSFNSKNKRGCYKRKRNTQEREEVSQTPKLDGHQWRKYGQKEILNAKYSRNYYRCTHKYDQNCQAIKQVQRIQEDPPLYKTTYLGHHTCNDFLNSAIILDSNNDPSDTSILLSFNNTFPTPTKQECPFLSSFPSPSSGKKEEVIPSSSPPETSLDDSSRHNNVTLPPPDFWDVMFDSVDLDDVNLLLDCDD* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1763 265 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 257 IPR044810 GO:0003700
Gso16g1763 265 SUPERFAMILY WRKY DNA-binding domain 101 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso16g1763 265 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 257 - -
Gso16g1763 265 MobiDBLite consensus disorder prediction 203 237 - -
Gso16g1763 265 SMART WRKY_cls 103 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso16g1763 265 Gene3D WRKY domain 87 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso16g1763 265 ProSiteProfiles WRKY domain profile. 105 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso16g1763 265 Pfam WRKY DNA -binding domain 105 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1763 Gso-Chr16 38226602 38228125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1763 5 164 WRKY Transcription Factor Family AT3G56400 40.341 1.14e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso16g1763 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1763 - - gmx:102670495 515.768