Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1753 ATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAAGTGTAAGATAAGAGGCTACAACCTCAAAGTCGACGCTCTGAACGAGATCCTCTCCTTCGCATCTCGCTTCGAAGGCCCCGACGAGGACGAAGCCATCGATCTCCTCCTCGTCGAGCTCGATTCATCTCTGAAATCCACCATAATCGACAAGGAGACGGTGCAGCGCGTGGTCAGCCTGTTGCTGGAAGCCACCGAGGCCACCGAGGAAACCTCCGATGCCGCCGCTGCCATTCGCGTCGTCGATGCGTTCCTCATCCCCAAGTATAAATACGACTATAGCAGAAAGCAGTTCTACGAGCACACAGGCAGCTTATCTATTCATGGAGAAGCATCAGCAAAGTCAGATCTGTACAGGGAAAGGTTTCTGTTGTTGTTCCAGAGGCTCTCTCGTGACCAGCATTTTTCAGCGCCTGCTTTTGAATCTGAATTTTCACATTTTGGGAGCTGTGAGATATCTCCCATTCAATCTCTGGTTGGGCAAACAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGCCATTACTATTTGGAAGACCTTACAGCTGCAGTTAAAATCAACTTGTCCAATGCAAGGATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTGGCTGAAGGGGAGATGCTTGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCTTTGGAGGATAGAGATAAGTCAGTTACACTACTTGCAGGGCATGACTTTTTTGGCGCGGGTACTTTCACTAAAGAGGAAACTATTAGACTGGCAGAGATGGAAGAAAAAGCAGTAAATGACATGTTTATTATACTTTCTGATATTTGGCTAGACAATGAAGAGACTTTGAAAAAGCTAGAGGTTGTTCTGGATGGCTTTGAGAAGGAGATAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTCTTCTAAGCCATGTAACCTTTCATTTCATTTTTATTCGAGCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACACGACTAAAAGAGCACAGTAAATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAAATGTTCTTCCTAGATGTGCTTTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATTCCCAATGCCATATTTTCAAGCAACCCCTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTCTTCCGCCAGGATATGCTGTATAGAATGCGCCGTTCATGTTTGATGCCTCCTTCTACAGAAGAGACTTGTGATCATTTTGAACATCTTGTTGCTACCATAACCCATCAGAGTCATCTATGTCCACTTCCTCTAACCGTACAACCCATCATCTGGAATTATGACCATTGTCTTTATCTTTATCCAACTCCACACACGATAGTTTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATACAGGTTCCTTCGCAATTGACAACACATTTGTGGCATATCGTCCCTGCTCTCAGGAAGTTGAATTGTCAGCCTTGCCATAA 1578 0.4385 MNASMRKKVQRKCKIRGYNLKVDALNEILSFASRFEGPDEDEAIDLLLVELDSSLKSTIIDKETVQRVVSLLLEATEATEETSDAAAAIRVVDAFLIPKYKYDYSRKQFYEHTGSLSIHGEASAKSDLYRERFLLLFQRLSRDQHFSAPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAVKINLSNARITTGLFSENTIVVAEGEMLVEGIFQVLTCGFPPLEDRDKSVTLLAGHDFFGAGTFTKEETIRLAEMEEKAVNDMFIILSDIWLDNEETLKKLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKLGEMIAAHTRLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFAIDNTFVAYRPCSQEVELSALP* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1753 525 Gene3D - 2 70 - -
Gso16g1753 525 Pfam DNA polymerase alpha/epsilon subunit B 282 487 IPR007185 GO:0003677|GO:0006260
Gso16g1753 525 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 5 523 IPR016266 GO:0003677|GO:0006261|GO:0008622
Gso16g1753 525 PIRSF DNA_pol_epsilon_2 1 525 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1753 16 481 Core DNA Replication Machinery Family AT5G22110 69.313 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1753 K02325 - gmx:100784116 1041.18